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The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki] [RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ] SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov |
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| Sim. Sc. | Cluster Size | PEG | Genome | Function | Aliases |
|---|---|---|---|---|---|
| 0 | 4 | fig|1027396.3.peg.95 | Listeria monocytogenes str. Scott A | Repressor (CI-like) [Bacteriophage A118] | |
| 0 | 3 | fig|393130.8.peg.2914 | Listeria monocytogenes J0161 | Repressor (CI-like) [Bacteriophage A118] | CDD:128803, GO:0043565, emb|CAB53822.1, gi|16798819, gi|254825098, gi|254901046, gi|254914004, gi|254933700, gi|5823634, gnl|md5|e4529560160c4de7779655f1, img|638289514, img|640974077, img|640976185, img|640983403, img|641752715, locus|LmonJ_020100014568, protein_id|ZP_05260970.1, ref|NP_463497.1, ref|ZP_05230099.1, ref|ZP_05260970.1, ref|ZP_05264016.1, ref|ZP_05267059.1, tr|Q9T188 |
| 0 | 3 | fig|393131.7.peg.2898 | Listeria monocytogenes J2818 | Repressor (CI-like) [Bacteriophage A118] | CDD:128803, GO:0043565, emb|CAB53822.1, gi|16798819, gi|254825098, gi|254901046, gi|254914004, gi|254933700, gi|5823634, gnl|md5|e4529560160c4de7779655f1, img|638289514, img|640974077, img|640976185, img|640983403, img|641752715, locus|LmonJ2_020100014448, protein_id|ZP_05264016.1, ref|NP_463497.1, ref|ZP_05230099.1, ref|ZP_05260970.1, ref|ZP_05264016.1, ref|ZP_05267059.1, tr|Q9T188 |
| 4.6e-14 | 3 | fig|272626.9.peg.78 | Listeria innocua Clip11262 | Phage repressor protein cI | GO:0043565, cmr|NT01LI0078, emb|CAC95306.1, geneID|1128436, gi|16412493, gi|16799151, gnl|md5|3bcc45fdc6434cb67e56e7df, img|637222789, kegg|lin:lin0073, locus|lin0073, protein_id|NP_469419.1, ref|NP_469419.1, tr|Q92FN1 |
| 5e-11 | 3 | fig|350688.3.peg.1025 | Alkaliphilus oremlandi oremlandii OhILAs | Phage repressor protein cI | ABW18595.1, Clos_1048, GO:0043565, InterPro:IPR001387, gb|ABW18595.1, gi|158140283, gi|158320084, gnl|md5|66b7469970ab8fc601187dab, img|639184833, img|641247231, kegg|aoe:Clos_1048, ref|YP_001512591.1, tr|A8MGQ1 |
| 5e-11 | 3 | fig|350688.5.peg.1093 | Alkaliphilus oremlandii OhILAs | Phage repressor protein cI | GO:0043565, InterPro:IPR001387, gb|ABW18595.1, geneID|5678288, gi|158140283, gi|158320084, gnl|md5|66b7469970ab8fc601187dab, img|639184833, img|641247231, kegg|aoe:Clos_1048, locus|Clos_1048, protein_id|YP_001512591.1, ref|YP_001512591.1, tr|A8MGQ1 |
| 0 | 2 | fig|1002366.3.peg.769 | Listeria innocua ATCC 33091 | Repressor (CI-like) [Bacteriophage A118] | InterPro:IPR001387, gi|370794478, locus|HMPREF0557_00808, protein_id|EHN62253.1 |
| 1.2e-25 | 2 | fig|267410.6.peg.1007 | Listeria monocytogenes str. 4b H7858 | Repressor (CI-like) [Bacteriophage A118] | GO:0043565, cmr|LMOh7858_2469, gb|EAL09946.1, gi|47019203, gi|47092426, gnl|md5|71aa6d4bf06cfde481ad404e, img|638426625, locus|LMOh7858_2469, protein_id|ZP_00230216.1, ref|ZP_00230216.1, tr|Q4EJJ0 |
| 1.2e-25 | 2 | fig|930781.3.peg.2732 | Listeria monocytogenes 1816 | Repressor (CI-like) [Bacteriophage A118] | gi|328465413, locus|LM1816_14857, protein_id|EGF36657.1 |
| 7.1e-023 | 2 | fig|637381.3.peg.2499 | Listeria monocytogenes 08-5923 | Repressor (CI-like) [Bacteriophage A118] | geneID|8759270, gi|284995911, gnl|md5|14be2a10fe5c4398d6107762, locus|LM5923_2476, protein_id|YP_003417679.1 |
| 7.1e-023 | 2 | fig|653938.3.peg.2546 | Listeria monocytogenes 08-5578 | Repressor (CI-like) [Bacteriophage A118] | geneID|8749508, gi|284802769, gnl|md5|14be2a10fe5c4398d6107762, locus|LM5578_2525, protein_id|YP_003414634.1 |
| 4.7e-014 | 2 | fig|393133.3.peg.2062 | Listeria monocytogenes 10403S | Repressor (CI-like) [Bacteriophage A118] | gi|254831247, gnl|md5|c21a43911ff31ea503745219, img|640978416, ref|ZP_05235902.1 |
| 6.8e-013 | 2 | fig|393121.7.peg.2392 | Listeria monocytogenes FSL J2-071 | Repressor (CI-like) [Bacteriophage A118] | CDD:128803, gi|254879906, gnl|md5|51297e696a8278f5465c6403, img|640963073, locus|LmonFSL_030200011964, protein_id|ZP_05252616.1, ref|ZP_05252616.1 |
| 2e-12 | 2 | fig|299033.6.peg.788 | Lactobacillus reuteri F275 | transcriptional regulator, XRE family | ABQ83064.1, GO:0043565, InterPro:IPR001387, Lreu_0801, gb|ABQ83064.1, gi|148531065, gi|148544031, gnl|md5|b31012da77e725953a8a5a59, img|640590633, kegg|lre:Lreu_0801, ref|YP_001271401.1, tr|A5VJP0 |
| 1.6e-011 | 2 | fig|553973.6.peg.3115 | Clostridium hylemonae DSM 15053 | hypothetical protein | gnl|md5|62373ce11c77992a6a4f4fd8 |
| 8e-11 | 2 | fig|1029822.3.peg.1041 | Lactobacillus salivarius NIAS840 | hypothetical protein | gi|334308338, locus|NIAS840_01042, protein_id|EGL99324.1 |
| 5.5e-011 | 2 | fig|526972.3.peg.881 | Bacillus cereus AH621 | LexA repressor (EC 3.4.21.88) | GO:0043565, gb|EEK70148.1, gi|228612974, gi|229170504, gnl|md5|4eabf57df6aa73325ce0e66c, ref|ZP_04298155.1, tr|C2Q4Z2 |
| 1e-10 | 2 | fig|749503.3.peg.545 | Enterococcus faecalis TX0309A | transcriptional regulator, Cro/CI family | InterPro:IPR001387, gi|315582455, locus|HMPREF9506_00579, protein_id|EFU94646.1 |
| 1e-10 | 2 | fig|749515.3.peg.541 | Enterococcus faecalis TX1342 | transcriptional regulator, Cro/CI family | InterPro:IPR001387, gi|315171648, locus|HMPREF9518_00571, protein_id|EFU15665.1 |