The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki]
[RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ]

SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov
The SEED

FIG search
PEGs that Might Be in Clusters
Sim. Sc. Cluster Size PEG Genome Function Aliases
7e-73 2 fig|996637.3.peg.1674 Streptomyces griseoaurantiacus M045 integrase (recombinase) gi|329936170, locus|SGM_1455, protein_id|ZP_08285963.1
4.6e-045 2 fig|749927.5.peg.361 Amycolatopsis mediterranei U32 Phage integrase geneID|9434567, gi|300782284, locus|AMED_0351, protein_id|YP_003762575.1
7.5e-044 2 fig|682181.3.peg.821 Streptomyces sp. SA3_actF integrase (recombinase) CDD:29510, gi|318075926, locus|SSA3_010100004245, protein_id|ZP_07983258.1
2.7e-040 2 fig|683219.3.peg.4553 Streptomyces sp. SA3_actG integrase (recombinase) CDD:29510, gi|318060887, locus|SSA3_010100023283, protein_id|ZP_07979608.1
2.2e-035 2 fig|298654.3.peg.1543 Frankia sp. EuI1c Integrase InterPro:IPR002104, gi|280960870, gnl|md5|ed094b6d6cb06aee92853aaa, locus|FraEuI1cDRAFT_1496, protein_id|ZP_06235442.1
9.7e-035 2 fig|749414.3.peg.6832 Streptomyces bingchenggensis BCW-1 integrase/recombinase gi|297160045, locus|SBI_06637, protein_id|ADI09757.1
1.5e-034 2 fig|680198.5.peg.5529 Streptomyces scabiei 87.22 Phage integrase geneID|8842423, gi|290960010, gnl|md5|345a5819c5f8a6b171dedc57, locus|SCAB_56241, protein_id|YP_003491192.1
6.8e-034 2 fig|647653.3.peg.3181 Streptomyces sp. ACTE integrase (recombinase) InterPro:IPR002104, gi|282863496, gnl|md5|636946f864a1382db98190df, locus|SACTEDRAFT_3100, protein_id|ZP_06272555.1
3.2e-032 2 fig|446462.8.peg.178 Actinosynnema mirum DSM 43827 Phage integrase InterPro:IPR002104, geneID|8324322, gi|256374329, locus|Amir_0172, protein_id|YP_003097989.1
1.3e-030 2 fig|405948.11.peg.7044 Saccharopolyspora erythraea NRRL 2338 integrase (recombinase) GO:0003677, GO:0006310, GO:0015074, GO:0032196, emb|CAM06193.1, gb|AAA98345.1, geneID|4946762, gene_name|int, gi|124697, gi|133916080, gi|134103457, gi|152674, gnl|md5|c09a66efeb509b4ce4fb9317, img|640177645, kegg|sen:SACE_7032, locus|SACE_7032, protein_id|YP_001109118.1, ref|YP_001109118.1, sp|INTR_SACER, sp|P22877, tr|A4FQ68
4.3e-029 2 fig|457425.4.peg.2602 Streptomyces albus J1074 integrase (recombinase) gnl|md5|845c633687e4f6b1abdaa289
1.1e-027 2 fig|591157.3.peg.2822 Streptomyces sp. SPB78 Integrase gnl|md5|ad0cbb4a19d59fd20427ff4d
4.2e-024 2 fig|465543.3.peg.870 Streptomyces sp. SPB74 Integrase gnl|md5|307ae69475c4ac3dc0426c29
1.0e-022 2 fig|479435.6.peg.392 Kribbella flavida DSM 17836 Phage integrase InterPro:IPR002104, geneID|8716979, gi|284028386, gnl|md5|1deedb7adcabc7f26e266402, locus|Kfla_0394, protein_id|YP_003378317.1
3.9e-022 2 fig|446462.6.peg.177 Actinosynnema mirum DSM 43827 Integrase InterPro:IPR002104, geneID|8324322, gi|256374329, gnl|md5|be63625df5827d2119c210c1, locus|Amir_0172, protein_id|YP_003097989.1

FIG search