The Homologs in Clusters Page

The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki]
[RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ]

SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov

The SEED

**PEGs that Might Be in Clusters**
Sim. Sc.	Cluster Size	PEG	Genome	Function	Aliases
3e-59	3	fig\|489825.3.peg.3536	Lyngbya majuscula 3L	FIG00874608: hypothetical protein
3e-59	3	fig\|489825.4.peg.3560	Moorea producta 3L	FIG00874608: hypothetical protein
0	2	fig\|351745.9.peg.2580	Shewanella sp. W3-18-1	DGR reverse transcriptase	InterPro:IPR000477, geneID\|4659465, gi\|120599269, locus\|Sputw3181_2465, protein_id\|YP_963843.1
4e-175	2	fig\|722419.3.peg.2096	Pseudoalteromonas haloplanktis ANT/505	DGR reverse transcriptase	gi\|332533803, locus\|PH505_av00270, protein_id\|ZP_08409659.1
1.5e-93	2	fig\|349161.6.peg.1356	Desulfotomaculum reducens MI-1	DGR reverse transcriptase	InterPro:IPR000477, InterPro:IPR002173, geneID\|4957181, gi\|134299090, locus\|Dred_1227, protein_id\|YP_001112586.1
2.4e-083	2	fig\|349102.13.peg.2145	Rhodobacter sphaeroides ATCC 17025	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	InterPro:IPR000477, geneID\|5082784, gi\|146278116, locus\|Rsph17025_2079, protein_id\|YP_001168275.1
8.1e-79	2	fig\|293826.6.peg.2651	Alkaliphilus metalliredigens QYMF	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	InterPro:IPR000477, geneID\|5312622, gi\|150390313, locus\|Amet_2550, protein_id\|YP_001320362.1
1.5e-063	2	fig\|376219.3.peg.3311	Arthrospira sp. PCC 8005	DGR reverse transcriptase
1.5e-063	2	fig\|376219.5.peg.3370	Arthrospira sp. PCC 8005	DGR reverse transcriptase
1.4e-62	2	fig\|290512.6.peg.2526	Prosthecochloris aestuarii DSM 271	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	InterPro:IPR000477, geneID\|6459080, gi\|194335165, locus\|Paes_2387, protein_id\|YP_002019731.1
2.7e-062	2	fig\|391612.3.peg.4238	Cyanothece sp CCY 0110	DGR reverse transcriptase	gi\|126660098, locus\|, protein_id\|
2.7e-062	2	fig\|391612.5.peg.4279	Cyanothece sp. CCY0110	DGR reverse transcriptase	gi\|126660098, locus\|CY0110_30840, protein_id\|ZP_01731218.1
4.0e-62	2	fig\|63737.11.peg.5718	Nostoc punctiforme PCC 73102	DGR reverse transcriptase	InterPro:IPR000477, geneID\|6254242, gi\|186684985, locus\|Npun_F4892, protein_id\|YP_001868181.1
1.2e-61	2	fig\|324925.4.peg.2322	Pelodictyon phaeoclathratiforme BU-1	DGR reverse transcriptase	InterPro:IPR000477, geneID\|6461427, gi\|194337212, locus\|Ppha_2189, protein_id\|YP_002019006.1
1.2e-61	2	fig\|324925.5.peg.2333	Pelodictyon phaeoclathratiforme BU-1	DGR reverse transcriptase	InterPro:IPR000477, geneID\|6461427, gi\|194337212, locus\|Ppha_2189, protein_id\|YP_002019006.1
1.9e-59	2	fig\|103690.1.peg.3804	Nostoc sp. PCC 7120	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	GeneID:1107095, NP_487537.1, alr3497, gi\|17230989
1.9e-59	2	fig\|103690.10.peg.4155	Nostoc sp. PCC 7120	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	geneID\|1107095, gi\|17230989, locus\|alr3497, protein_id\|NP_487537.1
7.1e-59	2	fig\|290317.9.peg.521	Chlorobium phaeobacteroides DSM 266	Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)	InterPro:IPR000477, geneID\|4569384, gi\|119356297, locus\|Cpha266_0459, protein_id\|YP_910941.1
2.2e-057	2	fig\|657318.4.peg.1270	Eubacterium rectale DSM 17629	DGR reverse transcriptase
1.3e-056	2	fig\|411902.9.peg.3367	Clostridium bolteae ATCC BAA-613	DGR reverse transcriptase	InterPro:IPR000477, gi\|160938970, locus\|CLOBOL_03864, protein_id\|ZP_02086321.1