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The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki] [RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ] SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov |
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| Sim. Sc. | Cluster Size | PEG | Genome | Function | Aliases |
|---|---|---|---|---|---|
| 0.000000 | 3 | fig|537006.5.peg.2002 | Parabacteroides johnsonii DSM 18315 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, gb|EEC96583.1, gi|218223933, gi|218261619, gnl|md5|7f0abb631a7048541b9a825a, ref|ZP_03476365.1, tr|B7BAH6 |
| 0.000000 | 2 | fig|752555.5.peg.254 | Prevotella bryantii B14 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gene_name|gltB, gi|300726008, locus|PBR_1457, protein_id|ZP_07059467.1 |
| 0.0 | 2 | fig|688246.3.peg.1055 | Prevotella multisaccharivorax DSM 17128 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | |
| 0.000000 | 2 | fig|435590.6.peg.3722 | Bacteroides vulgatus ATCC 8482 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | BVU_4007, GO:0006537, GO:0015930, GO:0055114, GeneID:5304966, YP_001301232.1, gb|ABR41610.1, gi|149934912, gi|150006488, gnl|md5|de956ee4183ba76379334930, img|640764110, kegg|bvu:BVU_4007, ref|YP_001301232.1, tr|A6L7E6 |
| 0.000000 | 2 | fig|435590.9.peg.4116 | Bacteroides vulgatus ATCC 8482 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, gb|ABR41610.1, geneID|5304966, gi|149934912, gi|150006488, gnl|md5|de956ee4183ba76379334930, img|640764110, kegg|bvu:BVU_4007, locus|BVU_4007, protein_id|YP_001301232.1, ref|YP_001301232.1, tr|A6L7E6 |
| 0.000000 | 2 | fig|457394.3.peg.877 | Bacteroides sp. 4_3_47FAA | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gb|EET14696.1, gi|254834387, gi|254881594, gnl|md5|34dc0725d379fa7c36bed4d8, ref|ZP_05254304.1 |
| 0.000000 | 2 | fig|469593.3.peg.3502 | Bacteroides sp. 3_1_40A | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | |
| 0.000000 | 2 | fig|667015.3.peg.2821 | Bacteroides salanitronis DSM 18170 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | geneID|10260644, gi|325299795, locus|Bacsa_2706, protein_id|YP_004259712.1 |
| 0.000000 | 2 | fig|483217.6.peg.763 | Bacteroides dorei DSM 17855 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, gb|EEB26648.1, gi|212666076, gi|212691323, gnl|md5|425c132376f4a5b376ba48a3, ref|ZP_03299451.1, tr|B6VU60 |
| 0.000000 | 2 | fig|556260.3.peg.1386 | Bacteroides sp. D4 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, gb|EEO44978.1, gi|229434901, gi|237726375, gnl|md5|d8a6f59b0d290b0bcc917b85, ref|ZP_04556856.1, tr|C3R7G9 |
| 0.000000 | 2 | fig|457395.6.peg.280 | Bacteroides sp. 9_1_42FAA | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, gb|EEO59272.1, gi|229453551, gi|237712230, gnl|md5|d343cb0cd13c70bf7de325bf, ref|ZP_04542711.1, tr|C3PVC3 |
| 0.000000 | 2 | fig|457391.3.peg.1573 | Bacteroides sp. 3_1_33FAA | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gnl|md5|c6776a6c61502db1bc38fa72 |
| 0.000000 | 2 | fig|484018.6.peg.1934 | Bacteroides plebeius DSM 17135 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | InterPro:IPR000583, InterPro:IPR002489, InterPro:IPR002932, InterPro:IPR006982, InterPro:IPR013785, gi|198275825, gnl|md5|56bf94cc67adc480a079909d, locus|BACPLE_02000, protein_id|ZP_03208356.1 |
| 0.0 | 2 | fig|762982.3.peg.2215 | Paraprevotella xylaniphila YIT 11841 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | InterPro:IPR000583, InterPro:IPR002489, InterPro:IPR002932, InterPro:IPR006982, gi|330997532, locus|HMPREF9442_02479, protein_id|ZP_08321379.1 |
| 0.0 | 2 | fig|706436.3.peg.3641 | Capnocytophaga sp. oral taxon 329 str. F0087 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | InterPro:IPR000583, InterPro:IPR002489, InterPro:IPR002932, InterPro:IPR006982, gi|332880485, locus|HMPREF9074_03934, protein_id|ZP_08448159.1 |
| 0.000000 | 2 | fig|471870.8.peg.1803 | Bacteroides intestinalis DSM 17393 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, InterPro:IPR000583, InterPro:IPR002489, InterPro:IPR002932, InterPro:IPR006982, InterPro:IPR013785, gb|EDV06819.1, gi|189437834, gi|189465560, gnl|md5|8fcd905a1b7ec6492deabad9, img|642810030, locus|BACINT_01918, protein_id|ZP_03014345.1, ref|ZP_03014345.1, tr|B3C8L4 |
| 0.000000 | 2 | fig|585543.3.peg.3213 | Bacteroides sp. D20 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gnl|md5|d37efa598735dda8d1e90d8c |
| 0.000000 | 2 | fig|537012.5.peg.3629 | Bacteroides cellulosilyticus DSM 14838 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gb|EEF87418.1, gi|224518313, gi|224540082, gnl|md5|027d88745c7340d16db540a5, ref|ZP_03680621.1 |
| 0.000000 | 2 | fig|411479.10.peg.2018 | Bacteroides uniformis ATCC 8492 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, InterPro:IPR000583, InterPro:IPR002489, InterPro:IPR002932, InterPro:IPR006982, gb|EDO54443.1, gi|156861012, gi|160889495, gnl|md5|0cfa9e3d979c57c24410dc33, img|641387959, locus|BACUNI_01919, protein_id|ZP_02070498.1, ref|ZP_02070498.1, tr|A7V2X7 |
| 0.000000 | 2 | fig|411901.7.peg.414 | Bacteroides caccae ATCC 43185 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, InterPro:IPR000583, InterPro:IPR002489, InterPro:IPR002932, InterPro:IPR006982, gb|EDM22071.1, gi|149130865, gi|153806188, gnl|md5|5b7a83b29d9fc1a0a9be5554, img|641000685, locus|BACCAC_00443, protein_id|ZP_01958856.1, ref|ZP_01958856.1, tr|A5ZC52 |
| 0.000000 | 2 | fig|556259.3.peg.4172 | Bacteroides sp. D2 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gnl|md5|8d9b6638976c033f8d2b45af |
| 0.0 | 2 | fig|665954.3.peg.1324 | Bacteroides ovatus 3_8_47FAA | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gi|335934861, locus|HMPREF1017_01301, protein_id|EGM96844.1 |
| 0.000000 | 2 | fig|411476.11.peg.3195 | Bacteroides ovatus ATCC 8483 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, InterPro:IPR000583, InterPro:IPR002489, InterPro:IPR002932, InterPro:IPR006982, gb|EDO10310.1, gi|156108565, gi|160885752, gnl|md5|015654de9edd21eb22485545, img|641384175, locus|BACOVA_03756, protein_id|ZP_02066755.1, ref|ZP_02066755.1, tr|A7M0X5 |
| 0.000000 | 2 | fig|469590.5.peg.3783 | Bacteroides sp. 2_2_4 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, gb|EEO57054.1, gi|229451263, gi|237719403, gnl|md5|93a5fe347dc967b96d22fd7f, ref|ZP_04549884.1, tr|C3QYM0 |
| 0.000000 | 2 | fig|702443.3.peg.1763 | Bacteroides ovatus SD CMC 3f | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gi|293370270, gnl|md5|64a6db0375ae2bde777dd8af, locus|CUY_1756, protein_id|ZP_06616830.1 |
| 0.000000 | 2 | fig|457390.3.peg.4619 | Bacteroides sp. 3_1_23 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gnl|md5|311d7fc0d1bea8bdcfb42143 |
| 0.000000 | 2 | fig|457424.5.peg.1614 | Bacteroides fragilis 3_1_12 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gi|255009601, gnl|md5|3852e46c69c1fc4f8c425d5d, ref|ZP_05281727.1 |
| 0.0 | 2 | fig|457387.3.peg.663 | Bacteroides sp. 1_1_30 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gi|335947829, locus|HMPREF0127_00662, protein_id|EGN09587.1 |
| 0.0 | 2 | fig|762984.3.peg.3059 | Bacteroides clarus YIT 12056 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | InterPro:IPR000583, InterPro:IPR002489, InterPro:IPR002932, InterPro:IPR006982, gi|329957960, locus|HMPREF9445_03277, protein_id|ZP_08298392.1 |
| 0.000000 | 2 | fig|449673.7.peg.2516 | Bacteroides stercoris ATCC 43183 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, InterPro:IPR000583, InterPro:IPR002489, InterPro:IPR002932, InterPro:IPR006982, InterPro:IPR013785, gb|EDS13716.1, gi|167697137, gi|167764468, gnl|md5|224c600bc622a65241b221aa, img|642199163, locus|BACSTE_02852, protein_id|ZP_02436589.1, ref|ZP_02436589.1, tr|B0NTM3 |
| 0.000000 | 2 | fig|483216.6.peg.2420 | Bacteroides eggerthii DSM 20697 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, gb|EEC52887.1, gi|217986552, gi|218131250, gnl|md5|31bd671e834551e1098dc3af, ref|ZP_03460054.1, tr|B7AKA5 |
| 0.000000 | 2 | fig|693979.3.peg.2208 | Bacteroides helcogenes P 36-108 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | geneID|10140876, gi|319901927, locus|Bache_2098, protein_id|YP_004161655.1 |
| 0.000000 | 2 | fig|470145.6.peg.2695 | Bacteroides coprocola DSM 17136 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | InterPro:IPR000583, InterPro:IPR002489, InterPro:IPR002932, InterPro:IPR006982, InterPro:IPR013785, gi|189461603, gnl|md5|d90ff07be239e7f2614ab644, locus|BACCOP_02262, protein_id|ZP_03010388.1 |
| 0.000000 | 2 | fig|469589.3.peg.3282 | Bacteroides sp. 2_1_33B | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gnl|md5|2169778a77a087bd72dc1372 |
| 0.000000 | 2 | fig|457388.5.peg.3613 | Bacteroides sp. 2_1_7 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gi|255015974, gnl|md5|832d3e3a7fda36494b728890, ref|ZP_05288100.1 |
| 0.000000 | 2 | fig|563193.3.peg.3791 | Parabacteroides sp. D13 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gb|EEU49644.1, gi|256736315, gi|256841999, gnl|md5|8f6d65862193c315f7ad4249, ref|ZP_05547504.1 |
| 0.000000 | 2 | fig|469591.4.peg.1267 | Bacteroides sp. 20_3 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | |
| 0.000000 | 2 | fig|469592.4.peg.3608 | Bacteroides sp. 3_1_19 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gnl|md5|60ae2e9ab755f6a15dd6da00 |
| 0.000000 | 2 | fig|435591.10.peg.308 | Parabacteroides distasonis ATCC 8503 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | BDI_0326, GO:0006537, GO:0015930, GO:0055114, GeneID:5305481, YP_001301733.1, gb|ABR42111.1, gi|149935414, gi|150006990, gnl|md5|0a9d13c85d51cfdf09df91c0, img|640764623, kegg|pdi:BDI_0326, ref|YP_001301733.1, tr|A6L8U7 |
| 0.000000 | 2 | fig|435591.13.peg.322 | Parabacteroides distasonis ATCC 8503 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, gb|ABR42111.1, geneID|5305481, gi|149935414, gi|150006990, gnl|md5|0a9d13c85d51cfdf09df91c0, img|640764623, kegg|pdi:BDI_0326, locus|BDI_0326, protein_id|YP_001301733.1, ref|YP_001301733.1, tr|A6L8U7 |
| 0.000000 | 2 | fig|411477.4.peg.2190 | Parabacteroides merdae ATCC 43184 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, InterPro:IPR000583, InterPro:IPR002489, InterPro:IPR002932, InterPro:IPR006982, gb|EDN86777.1, gi|154087732, gi|154492507, gnl|md5|9eb464ad2463e0bc04b933c2, img|641044120, locus|PARMER_02141, protein_id|ZP_02032133.1, ref|ZP_02032133.1, tr|A7AFF1 |
| 0.000000 | 2 | fig|665953.3.peg.3694 | Bacteroides eggerthii 1_2_48FAA | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | |
| 0.000000 | 2 | fig|457393.3.peg.2328 | Bacteroides sp. 4_1_36 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | |
| 0.000000 | 2 | fig|537011.5.peg.4504 | Prevotella copri DSM 18205 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | GO:0006537, GO:0015930, GO:0055114, gb|EEF19133.1, gi|223456954, gi|223463699, gnl|md5|b30d6a27e36c7bb819d15c4e, ref|ZP_03615235.1, tr|B9AJ72 |
| 0.000000 | 2 | fig|694427.4.peg.1131 | Paludibacter propionicigenes WB4 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | geneID|9998740, gi|313203581, locus|Palpr_1105, protein_id|YP_004042238.1 |
| 0.0 | 2 | fig|742766.3.peg.995 | Dysgonomonas gadei ATCC BAA-286 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gi|333381143, locus|HMPREF9455_00991, protein_id|ZP_08472825.1 |
| 0.0 | 2 | fig|742767.3.peg.1092 | Dysgonomonas mossii DSM 22836 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | gi|333377765, locus|HMPREF9456_01093, protein_id|ZP_08469498.1 |
| 0.0 | 2 | fig|886379.4.peg.495 | Anaerophaga thermohalophila DSM 12881 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | |
| 0.000000 | 2 | fig|431943.4.peg.1664 | Clostridium kluyveri DSM 555 | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | CKL_1620, GO:0004355, GO:0006537, GO:0015930, GO:0055114, GeneID:5392607, YP_001395010.1, dbj|BAH06556.1, gb|EDK33662.1, gi|146347126, gi|153954245, gi|219568572, gi|219854848, gltB, gnl|md5|2f15dc8494e533d14924617b, img|640858866, kegg|ckl:CKL_1620, kegg|ckr:CKR_1505, ref|YP_001395010.1, ref|YP_002471970.1, tr|A5N8N1, tr|B9E231 |