The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki]
[RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ]

SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov
The SEED

FIG search
PEGs that Might Be in Clusters
Sim. Sc. Cluster Size PEG Genome Function Aliases
2e-54 8 fig|315749.4.peg.2658 Bacillus cereus subsp. cytotoxis NVH 391-98 Phage terminase large subunit Bcer98_2596, GeneID:5347225, InterPro:IPR005021, YP_001375825.1, gb|ABS22830.1, gi|152025060, gi|152976308, gnl|md5|2913060d1c94a2a0ae78274b, img|638808012, img|640840099, kegg|bcy:Bcer98_2596, ref|YP_001375825.1, tr|A7GRS2
2e-54 8 fig|315749.8.peg.2740 Bacillus cytotoxicus NVH 391-98 Phage terminase large subunit InterPro:IPR005021, gb|ABS22830.1, geneID|5347225, gi|152025060, gi|152976308, gnl|md5|2913060d1c94a2a0ae78274b, img|638808012, img|640840099, kegg|bcy:Bcer98_2596, locus|Bcer98_2596, protein_id|YP_001375825.1, ref|YP_001375825.1, tr|A7GRS2
5.6e-053 8 fig|405532.5.peg.2488 Bacillus cereus B4264 Phage terminase large subunit gb|ACK62045.1, geneID|7100810, gi|218162053, gi|218234096, gnl|md5|0dba40a424cf220c5c571c2c, img|642045631, kegg|bcb:BCB4264_A2621, locus|BCB4264_A2621, protein_id|YP_002367330.1, ref|YP_002367330.1, tr|B7H5T3
5.6e-053 7 fig|405532.4.peg.2394 Bacillus cereus B4264 Phage terminase large subunit gb|ACK62045.1, geneID|7100810, gi|218162053, gi|218234096, gnl|md5|0dba40a424cf220c5c571c2c, img|642045631, kegg|bcb:BCB4264_A2621, locus|BCB4264_A2621, protein_id|YP_002367330.1, ref|YP_002367330.1, tr|B7H5T3
0.0 6 fig|929507.3.peg.1175 Clostridium botulinum BKT028387 Phage terminase large subunit
3.7e-056 6 fig|903814.3.peg.1192 Eubacterium limosum KIST612 Phage terminase, large subunit @ Intein-containing geneID|9883195, gi|310826888, locus|ELI_1296, protein_id|YP_003959245.1
2.9e-53 6 fig|405917.4.peg.1652 Bacillus cereus W Phage terminase large subunit gb|ABC40401.1, gb|EDX57900.1, gi|195993944, gi|196033510, gi|83658617, gi|85701381, gnl|md5|cccb424ff00f375716b28903, img|638318506, img|642034505, locus|BCW_1581, protein_id|ZP_03100922.1, ref|YP_459966.1, ref|ZP_03100922.1, tr|B3YSB0, tr|Q2LII3
1.3e-51 6 fig|66692.6.peg.1421 Bacillus clausii KSM-K16 Phage terminase, large subunit cmr|NT03BC1546, dbj|BAD63867.1, geneID|3201001, gi|56909340, gi|56963101, gnl|md5|a9514b4871817604ed458046, img|637619687, kegg|bcl:ABC1329, locus|ABC1329, protein_id|YP_174828.1, ref|YP_174828.1, tr|Q5WID8
8.0e-217 5 fig|471871.7.peg.531 Clostridium sporogenes ATCC 15579 Phage terminase, large subunit gb|EDU35736.1, gi|187771934, gi|187778309, gnl|md5|6a6957eb74e6baa8abf3f5ba, img|642849498, ref|ZP_02994782.1
0.0 5 fig|212717.1.peg.1913 Clostridium tetani E88 Phage terminase, large subunit CTC02132, GeneID:1060324, NP_782691.1, cmr|NT02CT2262, gb|AAO36628.1, gi|28204189, gi|28211747, gnl|md5|82d72908c9fcfe29f72b4fd9, img|637386880, kegg|ctc:CTC02132, pathema|ntct02.2.cds.ORF02412, ref|NP_782691.1, tr|Q892G7
0.0 5 fig|212717.8.peg.2218 Clostridium tetani E88 Phage terminase, large subunit cmr|NT02CT2262, gb|AAO36628.1, geneID|1060324, gi|28204189, gi|28211747, gnl|md5|82d72908c9fcfe29f72b4fd9, img|637386880, kegg|ctc:CTC02132, locus|CTC02132, pathema|ntct02.2.cds.ORF02412, protein_id|NP_782691.1, ref|NP_782691.1, tr|Q892G7
3.3e-053 5 fig|451754.5.peg.2687 Clostridium perfringens B str. ATCC 3626 Phage terminase large subunit gb|EDT22803.1, gi|168211354, gi|170710621, gnl|md5|6175973eec965a04fb1ee702, img|642101561, locus|AC1_2221, protein_id|ZP_02636979.1, ref|ZP_02636979.1, tr|B1RAB2
1.4e-50 5 fig|1126218.3.peg.3858 Bacillus licheniformis WX-02 Phage terminase, large subunit gi|383440686, locus|MUY_03765, protein_id|EID48461.1
1.4e-50 5 fig|279010.12.peg.3680 Bacillus licheniformis ATCC 14580 Phage terminase, large subunit cmr|NT03BL3842, cmr|NT04BL3943, gb|AAU25072.1, gb|AAU42441.1, geneID|3100485, gi|52005130, gi|52081919, gi|52349807, gi|52787305, gnl|md5|14e7b452d570ddb1cfd384de, img|639308465, img|639312739, kegg|bld:BLi03618, kegg|bli:BL03501, locus|BLi03618, protein_id|YP_093134.1, ref|YP_080710.1, ref|YP_093134.1, tr|Q65ES3
1.4e-50 5 fig|279010.13.peg.3676 Bacillus licheniformis ATCC 14580 Phage terminase, large subunit cmr|NT03BL3842, cmr|NT04BL3943, gb|AAU25072.1, gb|AAU42441.1, geneID|3029201, gi|52005130, gi|52081919, gi|52349807, gi|52787305, gnl|md5|14e7b452d570ddb1cfd384de, img|639308465, img|639312739, kegg|bld:BLi03618, kegg|bli:BL03501, locus|BL03501, protein_id|YP_080710.1, ref|YP_080710.1, ref|YP_093134.1, tr|Q65ES3
1e-49 5 fig|299033.6.peg.659 Lactobacillus reuteri F275 prophage Lp3 protein 15, terminase large subunit ABQ82935.1, InterPro:IPR005021, Lreu_0670, dbj|BAG25160.1, gb|ABQ82935.1, gb|EEI08530.1, gb|EEI74491.1, gi|148530936, gi|148543902, gi|183224643, gi|184153299, gi|227070155, gi|227194424, gi|227364811, gi|227531003, gnl|md5|251aae75f628fdb65f377f32, img|640590503, img|642584391, kegg|lre:Lreu_0670, kegg|lrf:LAR_0644, ref|YP_001271272.1, ref|YP_001841640.1, ref|ZP_03848859.1, ref|ZP_03961052.1, tr|A5VJB1, tr|B2G6S8, tr|C0Z0Y2, tr|C2F3Y1
0 4 fig|195102.1.peg.1181 Clostridium perfringens str. 13 Phage terminase large subunit CPE1118, GeneID:989427, NP_562034.1, cmr|NT03CP1185, dbj|BAB80824.1, gi|18144779, gi|18310100, gnl|md5|8766d1163417bad81fcfda32, img|637252473, kegg|cpe:CPE1118, pathema|ntcp03.3.cds.ORF01303, ref|NP_562034.1, tr|Q8XLC4
2.5e-239 4 fig|508765.6.peg.877 Clostridium botulinum B str. Eklund 17B Phage terminase large subunit gb|ACD24164.1, geneID|6291990, gi|187722943, gi|187934790, gnl|md5|141c64f21d713fbb18967204, img|641729869, kegg|cbk:CLL_A0942, locus|CLL_A0942, protein_id|YP_001885143.1, ref|YP_001885143.1, tr|B2TMF5
1.8e-081 4 fig|714359.3.peg.5043 Bacillus thuringiensis BMB171 probable phage-related terminase geneID|9195759, gi|296505546, gnl|md5|a9e261047fc2c672711c52cd, locus|BMB171_C4718, protein_id|YP_003667246.1
4.0e-080 4 fig|526993.3.peg.3993 Bacillus cereus AH1272 hypothetical protein gb|EEL89659.1, gb|EEL90474.1, gi|228739217, gi|228740120, gi|229021160, gi|229022065, gnl|md5|40e5590372271d44bf04dbb2, ref|ZP_04177803.1, ref|ZP_04178619.1, tr|C2Z2U7, tr|C2ZYN9
1.4e-50 4 fig|279010.5.peg.2171 Bacillus licheniformis ATCC 14580 Phage terminase, large subunit GeneID:3100485, LocusTag:BLi03618, YP_093134.1, cmr|NT03BL3842, cmr|NT04BL3943, gb|AAU25072.1, gb|AAU42441.1, gi|52005130, gi|52081919, gi|52349807, gi|52787305, gnl|md5|14e7b452d570ddb1cfd384de, img|639308465, img|639312739, kegg|bld:BLi03618, kegg|bli:BL03501, ref|YP_080710.1, ref|YP_093134.1, tr|Q65ES3
1e-49 4 fig|548485.3.peg.1061 Lactobacillus reuteri MM4-1A prophage Lp3 protein 15, terminase large subunit dbj|BAG25160.1, gb|ABQ82935.1, gb|EEI08530.1, gb|EEI74491.1, gi|148530936, gi|148543902, gi|183224643, gi|184153299, gi|227070155, gi|227194424, gi|227364811, gi|227531003, gnl|md5|251aae75f628fdb65f377f32, img|640590503, img|642584391, kegg|lre:Lreu_0670, kegg|lrf:LAR_0644, ref|YP_001271272.1, ref|YP_001841640.1, ref|ZP_03848859.1, ref|ZP_03961052.1, tr|A5VJB1, tr|B2G6S8, tr|C0Z0Y2, tr|C2F3Y1
1e-49 4 fig|557433.3.peg.687 Lactobacillus reuteri JCM 1112 prophage Lp3 protein 15, terminase large subunit dbj|BAG25160.1, gb|ABQ82935.1, gb|EEI08530.1, gb|EEI74491.1, geneID|6230578, gi|148530936, gi|148543902, gi|183224643, gi|184153299, gi|227070155, gi|227194424, gi|227364811, gi|227531003, gnl|md5|251aae75f628fdb65f377f32, img|640590503, img|642584391, kegg|lre:Lreu_0670, kegg|lrf:LAR_0644, locus|LAR_0644, protein_id|YP_001841640.1, ref|YP_001271272.1, ref|YP_001841640.1, ref|ZP_03848859.1, ref|ZP_03961052.1, tr|A5VJB1, tr|B2G6S8, tr|C0Z0Y2, tr|C2F3Y1
1e-49 4 fig|557433.4.peg.687 Lactobacillus reuteri JCM 1112 prophage Lp3 protein 15, terminase large subunit dbj|BAG25160.1, gb|ABQ82935.1, gb|EEI08530.1, gb|EEI74491.1, geneID|6230578, gi|148530936, gi|148543902, gi|183224643, gi|184153299, gi|227070155, gi|227194424, gi|227364811, gi|227531003, gnl|md5|251aae75f628fdb65f377f32, img|640590503, img|642584391, kegg|lre:Lreu_0670, kegg|lrf:LAR_0644, locus|LAR_0644, protein_id|YP_001841640.1, ref|YP_001271272.1, ref|YP_001841640.1, ref|ZP_03848859.1, ref|ZP_03961052.1, tr|A5VJB1, tr|B2G6S8, tr|C0Z0Y2, tr|C2F3Y1
1e-49 4 fig|557436.4.peg.682 Lactobacillus reuteri DSM 20016 prophage Lp3 protein 15, terminase large subunit InterPro:IPR005021, dbj|BAG25160.1, gb|ABQ82935.1, gb|EEI08530.1, gb|EEI74491.1, geneID|5189843, gi|148530936, gi|148543902, gi|183224643, gi|184153299, gi|227070155, gi|227194424, gi|227364811, gi|227531003, gnl|md5|251aae75f628fdb65f377f32, img|640590503, img|642584391, kegg|lre:Lreu_0670, kegg|lrf:LAR_0644, locus|Lreu_0670, protein_id|YP_001271272.1, ref|YP_001271272.1, ref|YP_001841640.1, ref|ZP_03848859.1, ref|ZP_03961052.1, tr|A5VJB1, tr|B2G6S8, tr|C0Z0Y2, tr|C2F3Y1
1e-49 4 fig|585517.3.peg.1311 Lactobacillus reuteri MM2-3 prophage Lp3 protein 15, terminase large subunit dbj|BAG25160.1, gb|ABQ82935.1, gb|EEI08530.1, gb|EEI74491.1, gi|148530936, gi|148543902, gi|183224643, gi|184153299, gi|227070155, gi|227194424, gi|227364811, gi|227531003, gnl|md5|251aae75f628fdb65f377f32, img|640590503, img|642584391, kegg|lre:Lreu_0670, kegg|lrf:LAR_0644, ref|YP_001271272.1, ref|YP_001841640.1, ref|ZP_03848859.1, ref|ZP_03961052.1, tr|A5VJB1, tr|B2G6S8, tr|C0Z0Y2, tr|C2F3Y1
1.5e-46 4 fig|1155766.14.peg.2211 Enterococcus faecium Aus0004 prophage Lp3 protein 15, terminase large subunit geneID|11955512, gi|383329452, locus|EFAU004_02134, protein_id|YP_005355336.1
0.000000 3 fig|451755.5.peg.2187 Clostridium perfringens E str. JGS1987 Phage terminase large subunit gb|EDT14760.1, gi|168206540, gi|170662077, gnl|md5|7b747952d11d26c5878d39df, img|642104477, locus|AC3_1413, protein_id|ZP_02632545.1, ref|ZP_02632545.1, tr|B1BUB7
1.8e-201 3 fig|445336.4.peg.2714 Clostridium botulinum Bf Phage terminase large subunit gb|EDT84876.1, gi|168183977, gi|182672915, gnl|md5|fb69dc7c5341539389e91c2c, img|642087696, locus|CBB_2599, pathema|bcb2.114.cds.ORF02577, protein_id|ZP_02618641.1, ref|ZP_02618641.1, tr|B1QNB2
6.2e-137 3 fig|451756.6.peg.2472 Clostridium perfringens CPE str. F4969 Phage terminase large subunit gb|EDT26024.1, gi|168214697, gi|170713842, gnl|md5|d712b181b965349a1aaa8688, img|642108453, locus|AC5_1436, protein_id|ZP_02640322.1, ref|ZP_02640322.1, tr|B1RJ32
4e-58 3 fig|658083.3.peg.159 Lachnospiraceae bacterium 6_1_63FAA Phage terminase large subunit @ intein-containing gi|331082102, locus|HMPREF0992_00154, protein_id|ZP_08331230.1
1.1e-053 3 fig|428128.7.peg.822 Eubacterium siraeum DSM 15702 Phage terminase large subunit @ intein-containing InterPro:IPR005021, gb|EDS01635.1, gi|167657505, gi|167749477, gnl|md5|76d9af1ea24e429b6a8666ef, img|642023129, locus|EUBSIR_00433, protein_id|ZP_02421604.1, ref|ZP_02421604.1, tr|B0MKU0
3.9e-179 2 fig|498214.7.peg.1803 Clostridium botulinum A3 str. Loch Maree Phage terminase large subunit cmr|CLK_0883, gb|ACA53873.1, geneID|6152398, gi|169405462, gi|170758473, gnl|md5|c0f29b7edf0cb3b9f569842f, img|641660522, kegg|cbl:CLK_0883, locus|CLK_0883, protein_id|YP_001786830.1, ref|YP_001786830.1, tr|B1L117
8.7e-128 2 fig|632245.3.peg.3249 Clostridium butyricum E4 str. BoNT E BL5262 Phage terminase large subunit gb|EEP53648.1, gi|237656092, gi|237667744, gnl|md5|399eeaa75c92e221f8de02c6, locus|CLP_2697, protein_id|ZP_04527728.1, ref|ZP_04527728.1, tr|C4IH03
2.3e-116 2 fig|447214.4.peg.1359 Clostridium butyricum 5521 Phage terminase large subunit gb|EDT75837.1, gb|EEP53824.1, gi|182378305, gi|182417842, gi|237656268, gi|237667920, gnl|md5|dad2a703a1f1d217367e58c5, img|642093045, locus|CBY_2836, pathema|bcb6.219.cds.ORF02770, protein_id|ZP_02949156.1, ref|ZP_02949156.1, ref|ZP_04527904.1, tr|B1QVM6, tr|C4II36
4.0e-080 2 fig|526994.3.peg.4148 Bacillus cereus AH1273 hypothetical protein gb|EEL89659.1, gb|EEL90474.1, gi|228739217, gi|228740120, gi|229021160, gi|229022065, gnl|md5|40e5590372271d44bf04dbb2, ref|ZP_04177803.1, ref|ZP_04178619.1, tr|C2Z2U7, tr|C2ZYN9
1.3e-053 2 fig|657319.3.peg.2497 Eubacterium siraeum 70/3 Phage terminase large subunit @ intein-containing
1.3e-51 2 fig|66692.3.peg.1147 Bacillus clausii KSM-K16 Phage terminase, large subunit GeneID:3201001, LocusTag:ABC1329, YP_174828.1, cmr|NT03BC1546, dbj|BAD63867.1, gi|56909340, gi|56963101, gnl|md5|a9514b4871817604ed458046, img|637619687, kegg|bcl:ABC1329, ref|YP_174828.1, tr|Q5WID8

FIG search