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SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov
The SEED

FIG search
PEGs that Might Be in Clusters
Sim. Sc. Cluster Size PEG Genome Function Aliases
1.4e-034 4 fig|535206.4.peg.1045 Enterococcus faecium E1162 Helix-turn-helix motif gb|EEV42450.1, gb|EEV44723.1, gb|EEV53209.1, gi|257813692, gi|257817395, gi|257826583, gi|257879464, gi|257881737, gi|257890223, gi|293560441, gnl|md5|bbd107f65987647ab84ea02b, locus|EfmE1162_1088, protein_id|ZP_06676933.1, ref|ZP_05659117.1, ref|ZP_05661390.1, ref|ZP_05669876.1
1.4e-034 4 fig|547468.4.peg.965 Enterococcus faecium U0317 Helix-turn-helix motif gb|EEV42450.1, gb|EEV44723.1, gb|EEV53209.1, gi|257813692, gi|257817395, gi|257826583, gi|257879464, gi|257881737, gi|257890223, gi|294621637, gnl|md5|bbd107f65987647ab84ea02b, locus|EfmU0317_1078, protein_id|ZP_06700802.1, ref|ZP_05659117.1, ref|ZP_05661390.1, ref|ZP_05669876.1
1.4e-034 4 fig|565656.3.peg.1375 Enterococcus faecium 1,230,933 Helix-turn-helix motif gb|EEV42450.1, gb|EEV44723.1, gb|EEV53209.1, gi|257813692, gi|257817395, gi|257826583, gi|257879464, gi|257881737, gi|257890223, gnl|md5|bbd107f65987647ab84ea02b, ref|ZP_05659117.1, ref|ZP_05661390.1, ref|ZP_05669876.1
1.4e-034 4 fig|565657.5.peg.876 Enterococcus faecium 1,231,502 Helix-turn-helix motif gb|EEV42450.1, gb|EEV44723.1, gb|EEV53209.1, gi|257813692, gi|257817395, gi|257826583, gi|257879464, gi|257881737, gi|257890223, gnl|md5|bbd107f65987647ab84ea02b, ref|ZP_05659117.1, ref|ZP_05661390.1, ref|ZP_05669876.1
1.4e-034 4 fig|749520.3.peg.2406 Enterococcus faecium TX0082 Helix-turn-helix motif
0 2 fig|333849.6.peg.4316 Enterococcus faecium DO Helix-turn-helix motif CDD:28977, GO:0043565, gb|EAN10707.1, gi|258615805, gi|68196278, gi|69244687, gnl|md5|43e9316eb55c644cde6e5742, img|638350825, locus|EfaeD_010100008846, protein_id|ZP_05713575.1, ref|ZP_00602951.1, ref|ZP_05713575.1, tr|Q3Y2K6
2.5e-052 2 fig|565658.4.peg.354 Enterococcus faecium 1,231,501 Helix-turn-helix motif gnl|md5|27426c4e0a26aa35f078947a
9.3e-052 2 fig|565660.4.peg.1834 Enterococcus faecium 1,231,410 Helix-turn-helix motif gnl|md5|8908409280e71459e985df27
9.3e-052 2 fig|565661.4.peg.2037 Enterococcus faecium 1,231,408 Helix-turn-helix motif gnl|md5|8908409280e71459e985df27
9.3e-052 2 fig|565664.3.peg.2424 Enterococcus faecium C68 Helix-turn-helix motif gnl|md5|8908409280e71459e985df27
3.0e-032 2 fig|933356.3.peg.2553 Enterococcus faecium E4452 Helix-turn-helix motif gi|364089109, locus|EfmE4452_2661, protein_id|EHM31825.1
2.6e-030 2 fig|565643.5.peg.1605 Enterococcus faecalis DS5 Helix-turn-helix motif gb|EEU65198.1, gi|256948566, gi|256958070, gnl|md5|cbecaa62114749609e8d5f5d, ref|ZP_05562241.1
4.5e-22 2 fig|193567.1.peg.411 Streptococcus pyogenes SSI-1 Phage transcriptional regulator GO:0043565, GeneID:1065511, NP_801673.1, SPs0411, cmr|NT04SP1628, cmr|NT06SP0438, dbj|BAC63506.1, gb|AAM80062.1, gi|21905199, gi|21910991, gi|28810569, gi|28876485, gi|28895323, gnl|md5|3265d8d5a96ac6d55e5d9533, img|637307996, img|637402373, img|638296911, kegg|spg:SpyM3_1455, kegg|sps:SPs0411, ref|NP_665259.1, ref|NP_795663.1, ref|NP_801673.1, tr|Q8K677
4.5e-22 2 fig|198466.1.peg.1455 Streptococcus pyogenes MGAS315 Phage transcriptional regulator GO:0043565, GeneID:1009770, NP_665259.1, SpyM3_1455, cmr|NT04SP1628, cmr|NT06SP0438, dbj|BAC63506.1, gb|AAM80062.1, gi|21905199, gi|21910991, gi|28810569, gi|28876485, gi|28895323, gnl|md5|3265d8d5a96ac6d55e5d9533, img|637307996, img|637402373, img|638296911, kegg|spg:SpyM3_1455, kegg|sps:SPs0411, ref|NP_665259.1, ref|NP_795663.1, ref|NP_801673.1, tr|Q8K677
1.3e-019 2 fig|193567.3.peg.446 Streptococcus pyogenes SSI-1 Phage transcriptional regulator GO:0043565, gb|AAT86158.1, geneID|1065511, gi|28895323, gi|50902443, gi|50913369, gnl|md5|c8aefd70fb13874f8a0cc032, img|637523154, kegg|spa:M6_Spy0023, locus|SPs0411, protein_id|NP_801673.1, ref|YP_059341.1, tr|Q5XEK5
1.3e-019 2 fig|198466.3.peg.1569 Streptococcus pyogenes MGAS315 Phage transcriptional regulator GO:0043565, gb|AAT86158.1, geneID|1009770, gi|21910991, gi|50902443, gi|50913369, gnl|md5|c8aefd70fb13874f8a0cc032, img|637523154, kegg|spa:M6_Spy0023, locus|SpyM3_1455, protein_id|NP_665259.1, ref|YP_059341.1, tr|Q5XEK5
1.3e-019 2 fig|286636.1.peg.23 Streptococcus pyogenes MGAS10394 Phage transcriptional regulator GO:0043565, M6_Spy0023, YP_059341.1, gb|AAT86158.1, gi|50902443, gi|50913369, gnl|md5|c8aefd70fb13874f8a0cc032, img|637523154, kegg|spa:M6_Spy0023, ref|YP_059341.1, tr|Q5XEK5
1.3e-019 2 fig|286636.3.peg.24 Streptococcus pyogenes MGAS10394 Phage transcriptional regulator GO:0043565, gb|AAT86158.1, geneID|2941125, gi|50902443, gi|50913369, gnl|md5|c8aefd70fb13874f8a0cc032, img|637523154, kegg|spa:M6_Spy0023, locus|M6_Spy0023, protein_id|YP_059341.1, ref|YP_059341.1, tr|Q5XEK5
3.9e-019 2 fig|644042.3.peg.469 Lactobacillus plantarum JDM1 phage transcriptional regulator, Cro/CI family gb|ACT61364.1, geneID|8189357, gi|254044571, gi|254555644, gnl|md5|35c0c56338f21481a55d00df, kegg|lpj:JDM1_0475, locus|JDM1_0475, protein_id|YP_003062061.1, ref|YP_003062061.1
4.4e-019 2 fig|453362.3.peg.1072 Streptococcus pneumoniae CDC1873-00 Phage transcriptional regulator, Cro/CI family EDT50968.1, GO:0043565, SP187300_0114, emb|CAR67892.1, gb|ACO18865.1, gb|EDT50968.1, gb|EDT96714.1, gi|168483683, gi|168493703, gi|172042922, gi|183576186, gi|220673431, gi|221230971, gi|225723012, gi|225853640, gnl|md5|5851ddea4742ed53f11c53a2, img|642186037, img|642212719, kegg|sjj:SPJ_0036, kegg|sne:SPN23F_00310, ref|YP_002510123.1, ref|YP_002735152.1, ref|ZP_02708635.1, ref|ZP_02717846.1, tr|B1S1C0, tr|B2E015, tr|B8ZJK2, tr|C1CHA9
4.4e-019 2 fig|453365.3.peg.1063 Streptococcus pneumoniae CDC3059-06 Phage transcriptional regulator, Cro/CI family EDT96714.1, GO:0043565, SP305906_0058, emb|CAR67892.1, gb|ACO18865.1, gb|EDT50968.1, gb|EDT96714.1, gi|168483683, gi|168493703, gi|172042922, gi|183576186, gi|220673431, gi|221230971, gi|225723012, gi|225853640, gnl|md5|5851ddea4742ed53f11c53a2, img|642186037, img|642212719, kegg|sjj:SPJ_0036, kegg|sne:SPN23F_00310, ref|YP_002510123.1, ref|YP_002735152.1, ref|ZP_02708635.1, ref|ZP_02717846.1, tr|B1S1C0, tr|B2E015, tr|B8ZJK2, tr|C1CHA9

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