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The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki] [RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ] SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov |
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| Sim. Sc. | Cluster Size | PEG | Genome | Function | Aliases |
|---|---|---|---|---|---|
| 3e-71 | 7 | fig|888820.3.peg.1305 | Streptococcus sanguinis SK1056 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|332360569, locus|HMPREF9393_1330, protein_id|EGJ38379.1 |
| 8e-71 | 7 | fig|888811.3.peg.1934 | Streptococcus sanguinis SK150 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|325693615, locus|HMPREF9383_1970, protein_id|EGD35534.1 |
| 1e-70 | 7 | fig|888813.3.peg.1282 | Streptococcus sanguinis SK330 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|327469179, locus|HMPREF9386_1305, protein_id|EGF14651.1 |
| 1e-70 | 7 | fig|888809.3.peg.351 | Streptococcus sanguinis SK72 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|325688067, locus|HMPREF9381_0358, protein_id|EGD30086.1 |
| 2e-70 | 7 | fig|888810.3.peg.1273 | Streptococcus sanguinis SK115 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|325690342, locus|HMPREF9382_1300, protein_id|EGD32346.1 |
| 4e-71 | 6 | fig|888815.3.peg.1314 | Streptococcus sanguinis SK353 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|324990185, locus|HMPREF9388_1340, protein_id|EGC22123.1 |
| 4e-71 | 6 | fig|888816.3.peg.1007 | Streptococcus sanguinis SK355 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|332363852, locus|HMPREF9389_1035, protein_id|EGJ41631.1 |
| 5e-71 | 6 | fig|888812.3.peg.996 | Streptococcus sanguinis SK160 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|325696935, locus|HMPREF9384_1007, protein_id|EGD38822.1 |
| 6e-71 | 6 | fig|888808.3.peg.449 | Streptococcus sanguinis SK49 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|332363302, locus|HMPREF9380_0462, protein_id|EGJ41087.1 |
| 6e-71 | 6 | fig|888821.3.peg.1939 | Streptococcus sanguinis SK1057 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|327458913, locus|HMPREF9394_1972, protein_id|EGF05261.1 |
| 1e-70 | 6 | fig|888819.3.peg.630 | Streptococcus sanguinis SK678 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|324995144, locus|HMPREF9392_0642, protein_id|EGC27056.1 |
| 1e-70 | 6 | fig|888824.3.peg.1276 | Streptococcus sanguinis SK1087 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|328945728, locus|HMPREF9397_1298, protein_id|EGG39879.1 |
| 1e-70 | 6 | fig|888807.3.peg.1228 | Streptococcus sanguinis SK1 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|327461817, locus|HMPREF9378_1249, protein_id|EGF08148.1 |
| 1e-70 | 6 | fig|888817.3.peg.1234 | Streptococcus sanguinis SK405 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|324993544, locus|HMPREF9390_1253, protein_id|EGC25464.1 |
| 1e-70 | 6 | fig|888818.3.peg.1322 | Streptococcus sanguinis SK408 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|327473553, locus|HMPREF9391_1362, protein_id|EGF18973.1 |
| 1e-70 | 6 | fig|888822.3.peg.1799 | Streptococcus sanguinis SK1058 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|327489101, locus|HMPREF9395_1836, protein_id|EGF20896.1 |
| 7e-69 | 6 | fig|888823.3.peg.1322 | Streptococcus sanguinis SK1059 | Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | gene_name|nikA, gi|332365699, locus|HMPREF9396_1359, protein_id|EGJ43457.1 |
| 1e-97 | 5 | fig|876138.3.peg.1732 | Streptococcus agalactiae FSL S3-026 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | gi|341576101, locus|FSLSAGS3026_08980, protein_id|EGS26512.1 |
| 1e-97 | 5 | fig|888745.3.peg.679 | Streptococcus agalactiae ATCC 13813 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | gi|319745480, locus|HMPREF9171_0703, protein_id|EFV97784.1 |
| 2e-68 | 5 | fig|681573.3.peg.1271 | Streptococcus equi subsp. zooepidemicus BHS5 | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | |
| 0 | 3 | fig|544875.4.peg.2517 | Enterococcus faecium E1636 | Phage antirepressor protein | gi|294616694, gnl|md5|e4fd32996878fa2bbc478f20, locus|EfmE1636_2730, protein_id|ZP_06696464.1 |
| 5.5e-081 | 3 | fig|565657.5.peg.1175 | Enterococcus faecium 1,231,502 | Phage antirepressor protein | gb|EEV44824.1, gi|257817496, gi|257881838, gnl|md5|7a7fe3fa839477576c38c3e3, ref|ZP_05661491.1 |
| 3.5e-059 | 3 | fig|585151.3.peg.1472 | Staphylococcus aureus subsp. aureus C427 | Phage antirepressor protein | GO:0003677, gb|AAX91208.1, gi|62636097, gi|66395673, gnl|md5|6ab6dbf00fd7d6a42b7f3b3d, img|638314457, ref|YP_240038.1, tr|Q4ZCI8 |
| 3.5e-059 | 3 | fig|644279.4.peg.1634 | Staphylococcus aureus subsp. aureus 132 | Phage antirepressor protein | GO:0003677, gb|AAX91208.1, gi|62636097, gi|66395673, gnl|md5|6ab6dbf00fd7d6a42b7f3b3d, img|638314457, ref|YP_240038.1, tr|Q4ZCI8 |
| 0 | 2 | fig|565665.3.peg.1938 | Enterococcus faecium D344SRF | Phage antirepressor protein | gi|289566846, gnl|md5|e4fd32996878fa2bbc478f20, locus|EDAG_01854, protein_id|ZP_06447256.1 |
| 0 | 2 | fig|565666.3.peg.1823 | Enterococcus faecium TC 6 | Phage antirepressor protein | gnl|md5|e4fd32996878fa2bbc478f20 |
| 5.6e-110 | 2 | fig|565660.4.peg.1837 | Enterococcus faecium 1,231,410 | Phage antirepressor protein | gb|EEV54030.1, gb|EEV57283.1, gi|257827404, gi|257830676, gi|257891044, gi|257894297, gnl|md5|936400c84d31e9d5d4a7dd2e, ref|ZP_05670697.1, ref|ZP_05673950.1 |
| 5.6e-110 | 2 | fig|565661.4.peg.2040 | Enterococcus faecium 1,231,408 | Phage antirepressor protein | gb|EEV54030.1, gb|EEV57283.1, gi|257827404, gi|257830676, gi|257891044, gi|257894297, gnl|md5|936400c84d31e9d5d4a7dd2e, ref|ZP_05670697.1, ref|ZP_05673950.1 |
| 5.6e-110 | 2 | fig|565664.3.peg.2420 | Enterococcus faecium C68 | Phage antirepressor protein | gb|EEV54030.1, gb|EEV57283.1, gi|257827404, gi|257830676, gi|257891044, gi|257894297, gnl|md5|936400c84d31e9d5d4a7dd2e, ref|ZP_05670697.1, ref|ZP_05673950.1 |
| 5.8e-107 | 2 | fig|333849.6.peg.4320 | Enterococcus faecium DO | Phage antirepressor protein | CDD:112200, GO:0003677, gb|EAN10705.1, gi|258615809, gi|68196276, gi|69244685, gnl|md5|8484225cfba9b6f96ea8446c, img|638350821, locus|EfaeD_010100008866, protein_id|ZP_05713579.1, ref|ZP_00602949.1, ref|ZP_05713579.1, tr|Q3Y2L0 |
| 2.8e-085 | 2 | fig|565658.4.peg.1362 | Enterococcus faecium 1,231,501 | Phage antirepressor protein | gb|EEV48083.1, gi|257820949, gi|257885097, gnl|md5|a155f8a377b6ab03d912ff84, ref|ZP_05664750.1 |
| 3.9e-083 | 2 | fig|546340.3.peg.1882 | Enterococcus faecium E1679 | Phage antirepressor protein | gi|294619297, gnl|md5|6503cd520cbc9d31fa7657a7, locus|EfmE1679_2108, protein_id|ZP_06698766.1 |
| 6.7e-081 | 2 | fig|749520.3.peg.1048 | Enterococcus faecium TX0082 | Phage antirepressor protein | InterPro:IPR003497, InterPro:IPR005039, gi|314948564, locus|HMPREF9522_01109, protein_id|ZP_07851944.1 |
| 3.5e-059 | 2 | fig|585148.3.peg.1062 | Staphylococcus aureus subsp. aureus Btn1260 | Phage antirepressor protein | GO:0003677, gb|AAX91208.1, gi|62636097, gi|66395673, gnl|md5|6ab6dbf00fd7d6a42b7f3b3d, img|638314457, ref|YP_240038.1, tr|Q4ZCI8 |
| 2.9e-058 | 2 | fig|158878.1.peg.855 | Staphylococcus aureus subsp. aureus Mu50 | Phage antirepressor protein | GO:0003677, GeneID:1120830, NP_371379.1, SAV0855, cmr|NT02SA0851, dbj|BAB57017.1, dbj|BAF77733.1, gi|14246624, gi|156721316, gi|156979181, gi|15923845, gi|255005643, gnl|md5|edb6840cea7ca7963f637b6a, img|637099368, img|640903591, kegg|sav:SAV0855, kegg|saw:SAHV_0850, ref|NP_371379.1, ref|YP_001441440.1, ref|ZP_05144244.2, tr|A7X043, tr|Q932B6 |
| 2.9e-058 | 2 | fig|158878.14.peg.880 | Staphylococcus aureus subsp. aureus Mu50 | Phage antirepressor protein | GO:0003677, cmr|NT02SA0851, dbj|BAB57017.1, dbj|BAF77733.1, geneID|1120830, gi|14246624, gi|156721316, gi|156979181, gi|15923845, gi|255005643, gnl|md5|edb6840cea7ca7963f637b6a, img|637099368, img|640903591, kegg|sav:SAV0855, kegg|saw:SAHV_0850, locus|SAV0855, protein_id|NP_371379.1, ref|NP_371379.1, ref|YP_001441440.1, ref|ZP_05144244.2, tr|A7X043, tr|Q932B6 |