|
The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki] [RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ] SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on aspen.cels.anl.gov |
|
| Sim. Sc. | Cluster Size | PEG | Genome | Function | Aliases |
|---|---|---|---|---|---|
| 6.9e-051 | 6 | fig|445337.5.peg.1546 | Clostridium botulinum C str. Eklund | Portal protein, phage associated | gi|168186895, locus|CBC_A0783, protein_id|ZP_02621530.1 |
| 1.8e-083 | 5 | fig|526990.3.peg.5822 | Bacillus cereus AH603 | Portal protein, phage associated | |
| 1.8e-083 | 5 | fig|527026.3.peg.1038 | Bacillus thuringiensis serovar sotto str. T04001 | Portal protein, phage associated | |
| 1.4e-053 | 5 | fig|610130.3.peg.812 | Clostridium saccharolyticum WM1 | Phage portal (connector) protein | InterPro:IPR006427, InterPro:IPR006944, geneID|9506022, gi|302385168, locus|Closa_0742, protein_id|YP_003820990.1 |
| 5.4e-049 | 5 | fig|527021.3.peg.1603 | Bacillus thuringiensis Bt407 | hypothetical protein | |
| 5.4e-049 | 5 | fig|527025.3.peg.2265 | Bacillus thuringiensis serovar thuringiensis str. T01001 | hypothetical protein | |
| 5.4e-049 | 5 | fig|527031.3.peg.2279 | Bacillus thuringiensis serovar berliner ATCC 10792 | hypothetical protein | |
| 0 | 4 | fig|333849.6.peg.4342 | Enterococcus faecium DO | Portal protein, phage associated | CDD:130600, gi|258615839, locus|EfaeD_010100009016, protein_id|ZP_05713609.1 |
| 0 | 4 | fig|565664.3.peg.2399 | Enterococcus faecium C68 | Portal protein, phage associated | |
| 8.7e-085 | 4 | fig|405535.8.peg.538 | Bacillus cereus AH820 | Portal protein, phage associated | |
| 1.8e-084 | 4 | fig|526999.3.peg.4547 | Bacillus mycoides Rock3-17 | hypothetical protein | |
| 3e-61 | 4 | fig|349161.6.peg.2856 | Desulfotomaculum reducens MI-1 | Phage portal (connector) protein | InterPro:IPR006427, InterPro:IPR006944, geneID|4957390, gi|134300445, locus|Dred_2606, protein_id|YP_001113941.1 |
| 1.9e-58 | 4 | fig|1027396.3.peg.1339 | Listeria monocytogenes str. Scott A | Portal protein, phage associated | |
| 1.9e-58 | 4 | fig|401650.12.peg.2747 | Listeria monocytogenes HPB2262 | Portal protein, phage associated | CDD:130600, gi|254933556, locus|LmonH_020100014066, protein_id|ZP_05266915.1 |
| 0 | 3 | fig|535206.4.peg.1023 | Enterococcus faecium E1162 | Portal protein, phage associated | gi|293560413, locus|EfmE1162_1060, protein_id|ZP_06676905.1 |
| 0 | 3 | fig|544875.4.peg.1937 | Enterococcus faecium E1636 | Portal protein, phage associated | gi|294616023, locus|EfmE1636_2109, protein_id|ZP_06695847.1 |
| 0 | 3 | fig|565657.5.peg.1154 | Enterococcus faecium 1,231,502 | Portal protein, phage associated | |
| 0 | 3 | fig|565660.4.peg.2675 | Enterococcus faecium 1,231,410 | Portal protein, phage associated | |
| 0 | 3 | fig|749520.3.peg.1860 | Enterococcus faecium TX0082 | Portal protein, phage associated | InterPro:IPR006427, InterPro:IPR006944, gi|314949458, locus|HMPREF9522_01968, protein_id|ZP_07852796.1 |
| 0 | 3 | fig|749521.3.peg.2689 | Enterococcus faecium TX0133A | Portal protein, phage associated | InterPro:IPR006427, InterPro:IPR006944, gi|314953606, locus|HMPREF9523_02878, protein_id|ZP_07856503.1 |
| 0 | 3 | fig|749522.3.peg.2781 | Enterococcus faecium TX0133a01 | Portal protein, phage associated | InterPro:IPR006427, InterPro:IPR006944, gi|314997915, locus|HMPREF9524_02961, protein_id|ZP_07862815.1 |
| 0 | 3 | fig|749523.3.peg.2719 | Enterococcus faecium TX0133a04 | Portal protein, phage associated | |
| 0 | 3 | fig|749524.3.peg.2730 | Enterococcus faecium TX0133B | Portal protein, phage associated | InterPro:IPR006427, InterPro:IPR006944, gi|314994362, locus|HMPREF9526_02910, protein_id|ZP_07859654.1 |
| 0 | 3 | fig|749525.3.peg.1129 | Enterococcus faecium TX0133C | Portal protein, phage associated | InterPro:IPR006427, InterPro:IPR006944, gi|314942079, locus|HMPREF9527_01193, protein_id|ZP_07848936.1 |
| 0 | 3 | fig|873127.3.peg.752 | Enterococcus faecium E4453 | Portal protein, phage associated | gi|364093879, locus|EfmE4453_2051, protein_id|EHM36110.1 |
| 1.5e-219 | 3 | fig|565665.3.peg.1916 | Enterococcus faecium D344SRF | Portal protein, phage associated | gi|289566820, locus|EDAG_01829, protein_id|ZP_06447231.1 |
| 1.5e-219 | 3 | fig|565666.3.peg.2776 | Enterococcus faecium TC 6 | Portal protein, phage associated | |
| 6.2e-084 | 3 | fig|526979.3.peg.389 | Bacillus cereus 95/8201 | Portal protein, phage associated | |
| 3.0e-083 | 3 | fig|526980.3.peg.682 | Bacillus cereus ATCC 10876 | Portal protein, phage associated | |
| 5.4e-083 | 3 | fig|526998.3.peg.1759 | Bacillus mycoides Rock1-4 | Portal protein, phage associated | |
| 2.8e-081 | 3 | fig|526971.3.peg.504 | Bacillus cereus MM3 | Portal protein, phage associated | |
| 8e-65 | 3 | fig|929506.3.peg.2984 | Clostridium botulinum BKT015925 | HK97 family phage portal protein | geneID|10462763, gi|331270736, locus|CbC4_7029, protein_id|YP_004397330.1 |
| 8e-65 | 3 | fig|929508.3.peg.2556 | Clostridium botulinum V891 | HK97 family phage portal protein | |
| 6.6e-063 | 3 | fig|526973.3.peg.1412 | Bacillus cereus m1293 | Portal protein, phage associated | |
| 3e-61 | 3 | fig|349161.4.peg.2564 | Desulfotomaculum reducens MI-1 | Phage portal (connector) protein | ABO51116.1, Dred_2606, InterPro:IPR006427, InterPro:IPR006944, gi|134053145 |
| 5.7e-058 | 3 | fig|401650.3.peg.3088 | Listeria monocytogenes Aureli 1997 | Portal protein, phage associated | |
| 5.4e-049 | 3 | fig|541229.3.peg.2665 | Bacillus thuringiensis serovar chinensis CT-43 | hypothetical protein | gi|326940366, locus|CT43_CH2584, protein_id|AEA16262.1 |
| 3.6e-049 | 3 | fig|441770.4.peg.2782 | Clostridium botulinum A str. ATCC 19397 | Portal protein, phage associated | CLB_2972, GeneID:5394570, YP_001385268.1, gi|153930816 |
| 5.9e-049 | 3 | fig|441770.6.peg.2879 | Clostridium botulinum A str. ATCC 19397 | Portal protein, phage associated | geneID|5394570, gi|153930816, locus|CLB_2972, protein_id|YP_001385268.1 |
| 1.4e-048 | 3 | fig|508767.4.peg.2041 | Clostridium botulinum E3 str. Alaska E43 | Portal protein, phage associated | geneID|6320262, gi|188588312, locus|CLH_2118, protein_id|YP_001921499.1 |
| 1.4e-048 | 3 | fig|508767.5.peg.2040 | Clostridium botulinum E3 str. Alaska E43 | Portal protein, phage associated | geneID|6320262, gi|188588312, locus|CLH_2118, protein_id|YP_001921499.1 |
| 2.7e-047 | 3 | fig|508765.6.peg.2172 | Clostridium botulinum B str. Eklund 17B | Portal protein, phage associated | geneID|6293014, gi|187933457, locus|CLL_A2259, protein_id|YP_001886448.1 |
| 3e-45 | 3 | fig|1002809.3.peg.1433 | Solibacillus silvestris StLB046 | Phage portal (connector) protein | gi|327439479, locus|SSIL_1421, protein_id|BAK15844.1 |