The SEED: an Annotation/Analysis Tool Provided by FIG
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SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov
The SEED

FIG search
PEGs that Might Be in Clusters
Sim. Sc. Cluster Size PEG Genome Function Aliases
1.6e-128 4 fig|264198.3.peg.129 Ralstonia eutropha JMP134 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) GO:0006810, GO:0016021, GeneID:3607833, LocusTag:Reut_C6206, YP_293374.1, cmr|NT01REB0293, gb|AAZ65517.1, gi|72123363, gi|72384020, gnl|md5|01501ecc6fa770b03e70c5ad, img|637689077, kegg|reu:Reut_C6206, ref|YP_293374.1, tr|Q46MV8
1.0e-115 4 fig|204773.3.peg.926 Herminiimonas arsenicoxydans Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) CAL61168.1, GO:0006810, GO:0016021, HEAR0986, emb|CAL61168.1, emrB, gi|133738123, gi|134094220, gnl|md5|4c380b53c1ca1874b0b78ba0, img|640168313, kegg|har:HEAR0986, ref|YP_001099295.1, tr|A4G3T1
6.2e-113 4 fig|398578.3.peg.3727 Delftia acidovorans SPH-1 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) ABX36374.1, Daci_3742, GO:0006810, GO:0016021, InterPro:IPR004638, InterPro:IPR007114, InterPro:IPR011701, gb|ABX36374.1, gi|160364761, gi|160899177, gnl|md5|a686aa9f4cf9b20443566982, img|639976545, img|641298841, kegg|dac:Daci_3742, ref|YP_001564759.1, tr|A9C2M5
1.2e-111 4 fig|267608.1.peg.1292 Ralstonia solanacearum GMI1000 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) GO:0006810, GO:0016021, GeneID:1220115, NP_519413.1, RSc1292, cmr|NT01RS1304, emb|CAD14994.1, emrB, gi|17428306, gi|17546011, gnl|md5|6b08ca4a9bfe43952b4697d3, img|637237669, kegg|rso:RSc1292, ref|NP_519413.1, tr|Q8XZV3
7.6e-111 4 fig|296591.1.peg.1174 Polaromonas sp. JS666 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) GO:0006810, GO:0016021, cmr|NT05PS3440, gb|ABE45148.1, gi|91698319, gi|91789094, gnl|md5|0ec7b7829f5cf05d095fa1c0, img|637942901, kegg|pol:Bpro_3234, ref|YP_550046.1, tr|Q127Z4
1.0e-107 4 fig|338969.3.peg.2648 Rhodoferax ferrireducens DSM 15236 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) GO:0006810, GO:0016021, GeneID:3961131, LocusTag:Rfer_1516, YP_522780.1, cds.2648, cmr|NT03RF1616, gb|ABD69249.1, gi|89345046, gi|89900309, gnl|md5|4fd395ac453bef5e2cbb63b5, img|637916336, kegg|rfr:Rfer_1516, ref|YP_522780.1, tr|Q21YA4
3.3e-106 4 fig|360910.3.peg.2212 Bordetella avium 197N Inner membrane component of tripartite multidrug resistance system GO:0006810, GO:0016021, GOA:Q2KYY8, InterPro:IPR004638, InterPro:IPR007114, InterPro:IPR011701, UniProtKB/TrEMBL:Q2KYY8, emb|CAJ49801.1, geneID|6266920, gene_name|emrB, gi|115423268, gi|187478682, gnl|md5|bf944b984768c52be1026e10, img|641722950, kegg|bav:BAV2192, locus|BAV2192, protein_id|YP_786706.1, ref|YP_786706.1, tr|Q2KYY8
1.6e-105 4 fig|76114.4.peg.1919 Azoarcus sp. EbN1 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) GENE:emrB, GO:0006810, GO:0016021, GeneID:3179786, LocusTag:ebA3448, YP_158972.1, cmr|NT01AE2105, emb|CAI08071.1, emrB, gi|56313426, gi|56477383, gnl|md5|6deadf6eaf958c0023735360, img|637609187, kegg|eba:ebA3448, ref|YP_158972.1, tr|Q5P3P3
3.1e-104 4 fig|40324.1.peg.2486 Stenotrophomonas maltophilia K279a Inner membrane component of tripartite multidrug resistance system GO:0006810, GO:0016021, emb|CAQ45064.1, gi|190011446, gi|190573524, gnl|md5|152ac99b6ab8e11afb7b8fd1, img|642692671, kegg|sml:Smlt1530, ref|YP_001971369.1, tr|B2FID0
5.8e-103 4 fig|190485.1.peg.1379 Xanthomonas campestris pv. campestris ATCC 33913 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) GO:0015520, GO:0015904, GO:0016021, GO:0046677, GeneID:1001817, NP_636774.1, XCC1400; emrB, cmr|NT01XC1934, cmr|NT02XC3276, gb|AAM40698.1, gb|AAY49886.1, gi|21112463, gi|21230857, gi|66574476, gi|66769144, gnl|md5|43065569f285c157230a2ed2, img|637273505, img|637658334, kegg|xcb:XC_2837, kegg|xcc:XCC1400, pmrB, ref|NP_636774.1, ref|YP_243906.1, tr|Q4UST7, tr|Q8PAS7
2.2e-102 4 fig|314280.3.peg.4 Photobacterium profundum 3TCK Inner membrane component of tripartite multidrug resistance system GO:0015520, GO:0015904, GO:0016021, GO:0046677, gb|EAS40949.1, gi|90324383, gi|90414576, gnl|md5|4f0192d1c92f6cb483ad2fba, img|639100554, ref|ZP_01222550.1, tr|Q1YX99
2.4e-101 4 fig|298386.1.peg.1983 Photobacterium profundum SS9 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) GO:0015520, GO:0015904, GO:0016021, GO:0046677, cmr|NT01PPA1958, emb|CAG23713.1, gi|46916950, gi|54303520, gnl|md5|47ccd74cd235abf6a641ed91, img|637590185, kegg|ppr:PBPRB1863, ref|YP_133513.1, tr|Q6LG67
1.5e-159 3 fig|615.1.peg.2626 Serratia marcescens Db11 Multidrug resistance protein B (ErmB) gnl|md5|c828ea4fd4ea8ad13b4c2ff6
8.9e-136 3 fig|243365.1.peg.766 Chromobacterium violaceum ATCC 12472 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) CV0766, GO:0006810, GO:0016021, GeneID:2547116, NP_900436.1, cmr|NT01CV0764, gb|AAQ58442.1, gi|34102075, gi|34496221, gnl|md5|31079fc9719d10b2c75235b8, img|637451527, kegg|cvi:CV_0766, ref|NP_900436.1, tr|Q7P003
5.4e-125 3 fig|36873.1.peg.7998 Burkholderia xenovorans LB400 Inner membrane component of tripartite multidrug resistance system GO:0015520, GO:0015904, GO:0016021, GO:0046677, gb|ABE32946.1, gi|91689746, gi|91785792, gnl|md5|3e9963f45b81b95b823de866, img|637949660, kegg|bxe:Bxe_A4486, ref|YP_560998.1, tr|Q13SJ3
2.2e-119 3 fig|392499.4.peg.3366 Sphingomonas wittichii RW1 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) GeneID:5196939, InterPro:IPR004638, InterPro:IPR007114, InterPro:IPR011701, Swit_3229, YP_001263713.1, gi|148556131, gnl|md5|e893c60f43538537b3f16a85
9.2e-117 3 fig|1085.1.peg.3514 Rhodospirillum rubrum Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) GO:0006810, GO:0016021, cmr|NT02RR0910, gb|ABC21659.1, gi|83575108, gi|83592194, gnl|md5|4992fa8f1d65a09999c714b2, img|637824946, kegg|rru:Rru_A0858, ref|YP_425946.1, tr|Q2RW36
2.9e-110 3 fig|216595.1.peg.7335 Pseudomonas fluorescens SBW25 Inner membrane component of tripartite multidrug resistance system GO:0006810, GO:0016021, emb|CAY50222.1, gi|229363174, gi|229591308, gnl|md5|6f45c50c6e66214f81c3f3b5, kegg|pfs:PFLU3875, ref|YP_002873427.1, tr|C3JYD7
1.7e-107 3 fig|208964.1.peg.5157 Pseudomonas aeruginosa PAO1 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) GO:0006810, GO:0016021, GeneID:879920, NP_253847.1, PA5160, cmr|NT03PA5965, gb|AAC31388.1, gb|AAG08545.1, gb|AE004928_11, gi|15600353, gi|3414726, gi|9951461, gnl|md5|18cb73e5843c1a882d9d86bd, img|637055604, kegg|pae:PA5160, ref|NP_253847.1, tr|O85163
4.3e-106 3 fig|397945.5.peg.288 Acidovorax avenae subsp. citrulli AAC00-1 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) Aave_0322, GO:0006810, GO:0016021, GeneID:4669665, InterPro:IPR004638, InterPro:IPR007114, InterPro:IPR011701, YP_968703.1, gb|ABM30929.1, gi|120587489, gi|120609025, gnl|md5|a8af4a399deb9250e370b0e6, img|639821528, kegg|aav:Aave_0322, ref|YP_968703.1, tr|A1TIZ1
5.3e-096 3 fig|177439.1.peg.155 Desulfotalea psychrophila LSv54 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) DP0155, GO:0015520, GO:0015904, GO:0016021, GO:0046677, GeneID:2945695, YP_063891.1, cmr|NT01DP0178, emb|CAG34884.1, gi|50875044, gi|51244007, gnl|md5|0edbf3de7f2bb899e9476fa6, img|637527403, kegg|dps:DP0155, ref|YP_063891.1, tr|Q6ARZ1
2.2e-259 2 fig|83333.1.peg.2340 Escherichia coli K12 Multidrug efflux system EmrKY-TolC, inner-membrane proton/drug antiporter EmrY (MFS type) GO:0005886, GO:0006810, GO:0016021, GeneID:946835, NP_416868.1, b2367, cmr|EcSMS35_2517, cmr|NT01EC2867, cmr|NT02SB2590, cmr|NT04SS2621, cmr|NT11EC2459, dbj|BAA11237.1, dbj|BAA16230.1, dbj|BAI26627.1, dbj|BAI31658.1, dbj|BAI36923.1, emb|CAR08992.2, emb|CAR13876.1, emb|CAR18634.1, emb|CAS10108.1, emb|CAU98527.1, emrY, eric|ABE-0007806, eric|ADD-0002692, eric|ADO-0007087, eric|ADV-0002647, eric|ADY-0002445, eric|AEM-0000665, gb|AAC75426.1, gb|AAZ89099.1, gb|ABB66954.1, gb|ABV19064.1, gb|ACA76968.1, gb|ACB03525.1, gb|ACB18710.1, gb|ACR64681.1, gb|EDU62093.1, gi|1060877, gi|157079356, gi|157157326, gi|16130299, gi|169754269, gi|169889818, gi|170019341, gi|170081983, gi|170520532, gi|1706646, gi|170682814, gi|1788710, gi|1799769, gi|188486990, gi|188491791, gi|215265703, gi|215487631, gi|218352741, gi|218370821, gi|218428074, gi|218432981, gi|218690510, gi|218696009, gi|218700835, gi|218705884, gi|238862683, gi|238901536, gi|256021933, gi|257755125, gi|257760161, gi|257765428, gi|73856392, gi|74312915, gi|81246246, gi|82544835, gi|89109187, gnl|md5|ba44998f4457e92019e2ad73, img|637002342, img|637015712, img|637808080, img|640229067, img|640430202, img|640926309, img|641600723, img|641607952, img|641617389, kegg|ebw:BWG_2135, kegg|ecd:ECDH10B_2532, kegg|ecg:E2348C_2560, kegg|ecj:JW2364, kegg|eck:EC55989_2660, kegg|ecl:EcolC_1302, kegg|ecm:EcSMS35_2517, kegg|eco:b2367, kegg|ecq:ECED1_2814, kegg|ect:ECIAI39_2510, kegg|ecw:EcE24377A_2653, kegg|elf:LF82_0559, kegg|eum:ECUMN_2696, kegg|sbo:SBO_2393, kegg|ssn:SSON_2458, ref|AP_002967.1, ref|NP_416868.1, ref|YP_001463702.1, ref|YP_001724295.1, ref|YP_001731303.1, ref|YP_001744560.1, ref|YP_002330062.1, ref|YP_002398722.1, ref|YP_002403676.1, ref|YP_002408464.1, ref|YP_002413403.1, ref|YP_002927332.1, ref|YP_311334.1, ref|YP_408782.1, ref|ZP_02999061.1, ref|ZP_05435798.1, sp|EMRY_ECOLI, sp|P52600, tr|A7ZPH3, tr|B1IX95, tr|B1LMG3, tr|B1X9P0, tr|B2N4S5, tr|B7LBS0, tr|B7MY26, tr|B7N5W7, tr|B7NPQ1, tr|B7UG77, tr|C4ZVQ4, tr|Q31YA4, tr|Q3YZG3
2.2e-163 2 fig|187410.1.peg.904 Yersinia pestis KIM Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) GO:0015520, GO:0015904, GO:0016021, GO:0046677, GeneID:1145868, NP_668252.1, cmr|NT06YP0923, cmr|YpAngola_A3461, cmr|YpsIP31758_3202, emb|CAH20095.1, emb|CAL21861.1, emrB, eric|ABI-0030572, eric|ABY-0126303, eric|ACQ-0235689, eric|ACZ-0000907, eric|ADI-0003321, eric|ADS-0007209, eric|BAC-0002177, eric|BAD-0001014, eric|BAE-0003309, eric|BAF-0000268, eric|BAI-0003480, eric|BAL-0001829, eric|BAM-0003447, eric|BAN-0002742, eric|BAO-0002697, eric|BAP-0002171, eric|BAQ-0004142, gb|AAM84503.1, gb|AAS60930.1, gb|ABG14721.1, gb|ABG17160.1, gb|ABP41266.1, gb|ABS49466.1, gb|ABX88305.1, gb|ACA69608.1, gb|ACC87878.1, gb|AE013695_5, gb|EDM41378.1, gb|EDR34647.1, gb|EDR38757.1, gb|EDR42380.1, gb|EDR50339.1, gb|EDR56552.1, gb|EDR63394.1, gb|EDR67237.1, gb|EEO77234.1, gb|EEO79924.1, gb|EEO85293.1, gb|EEO88679.1, gi|108774641, gi|108780663, gi|108808750, gi|108810993, gi|115348904, gi|145211859, gi|145600163, gi|149291304, gi|149364891, gi|152962005, gi|153950510, gi|162354357, gi|162421542, gi|165916040, gi|165921560, gi|165926632, gi|165935895, gi|165990079, gi|166011079, gi|166205859, gi|166213072, gi|166960531, gi|167051986, gi|167057491, gi|167399482, gi|167421612, gi|167423321, gi|169752090, gi|170025556, gi|186697249, gi|186894223, gi|218930293, gi|21957657, gi|22124829, gi|229681140, gi|229687851, gi|229695246, gi|229700649, gi|229838880, gi|229896373, gi|229899449, gi|229901211, gi|45435371, gi|45440514, gi|51588487, gi|51595205, gnl|md5|8168f3a7d9ed96317789e785, img|637202240, img|637309367, img|637491361, img|637532470, img|638038848, img|638044865, img|638732753, img|638736334, img|639043246, img|640479762, img|640866209, img|641102707, img|641341279, img|641598416, img|641823292, img|641829903, img|641831771, img|641838337, img|641842980, img|641891612, img|642607046, kegg|ypa:YPA_2759, kegg|ypb:YPTS_0897, kegg|ype:YPO3268, kegg|ypg:YpAngola_A3461, kegg|ypi:YpsIP31758_3202, kegg|ypk:y0921, kegg|ypm:YP_0663, kegg|ypn:YPN_0828, kegg|ypp:YPDSF_2904, kegg|yps:YPTB0855, kegg|ypy:YPK_3339, ref|NP_668252.1, ref|NP_992053.1, ref|YP_001164239.1, ref|YP_001402162.1, ref|YP_001607796.1, ref|YP_001722061.1, ref|YP_001871335.1, ref|YP_002348168.1, ref|YP_069396.1, ref|YP_646760.1, ref|YP_652666.1, ref|ZP_01886926.1, ref|ZP_02222464.1, ref|ZP_02224465.1, ref|ZP_02231977.1, ref|ZP_02239107.1, ref|ZP_02305006.1, ref|ZP_02313365.1, ref|ZP_02315074.1, ref|ZP_04459039.1, ref|ZP_04511542.1, ref|ZP_04514592.1, ref|ZP_04516333.1, tr|A4TPQ4, tr|A6BMN6, tr|A7FLN4, tr|A9R3L3, tr|A9Z3H0, tr|B0A095, tr|B0GBM3, tr|B0GVV3, tr|B0H1D6, tr|B0HJI1, tr|B0HXN0, tr|B1JIM4, tr|B2K612, tr|C4H9I7, tr|C4HM63, tr|C4HZB0, tr|Q1C4A1, tr|Q1CLH0, tr|Q66E38, tr|Q7CK80, y0921
4.0e-160 2 fig|321314.4.peg.2362 Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 Multidrug resistance protein B (ErmB) GENE:emrB, GO:0006810, GO:0016021, GeneID:3335251, LocusTag:SC2749, YP_217736.1, cmr|NT06SE3127, emrB, eric|ADB-0003216, gb|AAX66655.1, gi|62128952, gi|62181319, gnl|md5|2b6724fdc992e3b91a41341e, img|637641646, kegg|sec:SC2749, ref|YP_217736.1, tr|Q57KV7
5.3e-157 2 fig|171440.1.peg.1074 Photorhabdus asymbiotica subsp. asymbiotica Multidrug resistance protein B (ErmB) emb|CAQ85273.1, gi|253782109, gi|253990659, gnl|md5|b965a7912ee79a6bf37474ab, kegg|pay:PAU_03185, ref|YP_003042015.1
7.2e-154 2 fig|584.1.peg.994 Proteus mirabilis HI4320 Multidrug resistance protein B (ErmB) GO:0006810, GO:0016021, emb|CAR41012.1, gi|194681789, gi|197284302, gnl|md5|7fc8316747891425547bc521, img|642576789, kegg|pmr:PMI0402, ref|YP_002150174.1, tr|B4EUY3
2.5e-146 2 fig|262727.1.peg.240 Haemophilus influenzae R2846 Multidrug resistance protein B (ErmB) CDD:pfam00083, CDD:pfam01306, CDD:pfam03137, CDD:pfam06609, COG: COG0477, Hflu1020251, ZP_00155813.1, gi|42630269, gnl|md5|7e24c7db83e3c7f0e4de2d78, img|638419339, ref|ZP_00155813.1
2.7e-132 2 fig|487.2.peg.1597 Neisseria meningitidis FAM18 Inner membrane component of tripartite multidrug resistance system GO:0015520, GO:0015904, GO:0016021, GO:0046677, emb|CAM11018.1, gi|120867249, gi|121635543, gnl|md5|b20d6530dfc35f9e0d330ca4, img|639828626, kegg|nmc:NMC1852, ref|YP_975788.1, tr|A1KVW3
4.3e-099 2 fig|525897.4.peg.1933 Desulfomicrobium baculatum DSM 4028 Inner-membrane proton/drug antiporter (MFS-type) of tripartite multidrug efflux system GO:0005215, GO:0006810, GO:0016021, gb|ACU91056.1, gi|256579920, gi|256830744, gnl|md5|ddc44e2a8695bfbb0ef3e0e1, kegg|dba:Dbac_2981, ref|YP_003159472.1, tr|C1SZV1
9.6e-098 2 fig|264201.1.peg.127 Parachlamydia sp. UWE25 Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) GO:0015520, GO:0015904, GO:0016021, GO:0046677, YP_007126.1, cmr|NT03PS0136, emb|CAF22851.1, emrB, gi|46399402, gi|46445761, gnl|md5|4a68a5d64a47b234a2467d9b, img|637501018, kegg|pcu:pc0127, pc0127, ref|YP_007126.1, tr|Q6MEZ8
4.0e-089 2 fig|883.3.peg.1170 Desulfovibrio vulgaris str. 'Miyazaki F' Inner-membrane proton/drug antiporter (MFS-type) of tripartite multidrug efflux system GO:0015520, GO:0015904, GO:0016021, GO:0046677, InterPro:IPR001411, InterPro:IPR004638, InterPro:IPR005829, InterPro:IPR007114, InterPro:IPR011701, gb|ACL08053.1, geneID|7173000, gi|218757154, gi|218886200, gnl|md5|262fcd64c9f189db293e4ffd, kegg|dvm:DvMF_1099, locus|DvMF_1099, protein_id|YP_002435521.1, ref|YP_002435521.1, tr|B8DK91

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