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The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki] [RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ] SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov |
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| Sim. Sc. | Cluster Size | PEG | Genome | Function | Aliases |
|---|---|---|---|---|---|
| 4.1e-032 | 5 | fig|211586.1.peg.2689 | Shewanella oneidensis MR-1 | Phage major capsid protein # Fam0024 | GO:0019038, GeneID:1170651, NP_718532.1, SO2963, cmr|SO_2963, gb|AAN55976.1, gb|AE015735_10, gi|24349071, gi|24374489, gnl|md5|8176179b7900191e05d9c5f7, img|637344774, kegg|son:SO_2963, ref|NP_718532.1, tr|Q8ED08 |
| 4.1e-032 | 5 | fig|211586.12.peg.2860 | Shewanella oneidensis MR-1 | Phage major capsid protein # Fam0024 | GO:0019038, cmr|SO_2963, gb|AAN55976.1, gb|AE015735_10, geneID|1170651, gi|24349071, gi|24374489, gnl|md5|8176179b7900191e05d9c5f7, img|637344774, kegg|son:SO_2963, locus|SO_2963, protein_id|NP_718532.1, ref|NP_718532.1, tr|Q8ED08 |
| 9.4e-029 | 5 | fig|345075.15.peg.446 | Vibrio cholerae V51 | Phage major capsid protein | gb|EAZ50916.1, gi|125622597, gi|254224909, gnl|md5|d1b4c130691ffa97507ce2dd, img|638708508, ref|ZP_04918524.1, tr|A3EHW1 |
| 3e-28 | 5 | fig|1189622.3.peg.469 | Pseudomonas syringae pv. tabaci str. 6605 | Phage major capsid protein | |
| 1.6e-028 | 5 | fig|931281.3.peg.2785 | Pseudomonas putida BIRD-1 | Phage major capsid protein | gi|313499017, locus|PPUBIRD1_2764, protein_id|ADR60383.1 |
| 6e-62 | 4 | fig|889487.3.peg.5453 | Streptomyces sp. S4 | Putative phage capsid protein | |
| 9.3e-035 | 4 | fig|441163.4.peg.5661 | Burkholderia oklahomensis EO147 | Phage major capsid protein | CDD:68633, gi|167566458, locus|BoklE_010100028129, protein_id|ZP_02359374.1 |
| 1.1e-032 | 4 | fig|1085027.3.peg.1344 | Burkholderia pseudomallei 1026a | Phage major capsid protein | gi|385359665, locus|BP1026A_1246, protein_id|EIF65620.1 |
| 1.1e-032 | 4 | fig|320371.4.peg.1434 | Burkholderia pseudomallei 1710a | Phage major capsid protein #Fam0024 | cmr|BURPS1710b_A1806, gb|AAR23156.1, gb|ABA50142.1, gb|EET08304.1, gi|254218920, gi|254260231, gi|38505387, gi|38707895, gi|76580667, gi|76811214, gnl|md5|f0a703cac16c80261baf82e9, img|637728138, img|638304314, kegg|bpm:BURPS1710b_1682, pathema|gbp1710a.890.cds.ORF0190, pathema|gbp1710b.450.cds.ORFF017, ref|NP_945035.1, ref|YP_333085.1, ref|ZP_04951285.1, tr|Q3JTL8, tr|Q6JIM7 |
| 1.1e-032 | 4 | fig|320372.3.peg.4499 | Burkholderia pseudomallei 1710b | Phage major capsid protein #Fam0024 | GeneID:3691572, LocusTag:BURPS1710b_1682, YP_333085.1, cmr|BURPS1710b_A1806, gb|AAR23156.1, gb|ABA50142.1, gb|EET08304.1, gi|254218920, gi|254260231, gi|38505387, gi|38707895, gi|76580667, gi|76811214, gnl|md5|f0a703cac16c80261baf82e9, img|637728138, img|638304314, kegg|bpm:BURPS1710b_1682, pathema|gbp1710a.890.cds.ORF0190, pathema|gbp1710b.450.cds.ORFF017, ref|NP_945035.1, ref|YP_333085.1, ref|ZP_04951285.1, tr|Q3JTL8, tr|Q6JIM7 |
| 1.1e-032 | 4 | fig|320372.6.peg.1745 | Burkholderia pseudomallei 1710b | Phage major capsid protein #Fam0024 | cmr|BURPS1710b_A1806, gb|AAR23156.1, gb|ABA50142.1, gb|EET08304.1, geneID|3691572, gi|254218920, gi|254260231, gi|38505387, gi|38707895, gi|76580667, gi|76811214, gnl|md5|f0a703cac16c80261baf82e9, img|637728138, img|638304314, kegg|bpm:BURPS1710b_1682, locus|BURPS1710b_1682, pathema|gbp1710a.890.cds.ORF0190, pathema|gbp1710b.450.cds.ORFF017, protein_id|YP_333085.1, ref|NP_945035.1, ref|YP_333085.1, ref|ZP_04951285.1, tr|Q3JTL8, tr|Q6JIM7 |
| 1.1e-032 | 4 | fig|884204.3.peg.2332 | Burkholderia pseudomallei 1026b | Phage major capsid protein | gi|385659301, locus|BP1026B_I2111, protein_id|AFI66724.1 |
| 9e-31 | 4 | fig|888063.3.peg.2714 | Enterobacter hormaechei ATCC 49162 | Phage major capsid protein | gi|334124570, locus|HMPREF9086_2835, protein_id|ZP_08498572.1 |
| 1e-30 | 4 | fig|1030157.3.peg.2204 | Sphingomonas sp. KC8 | Phage major capsid protein | |
| 8.5e-031 | 4 | fig|667127.3.peg.1904 | Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 | Phage major capsid protein #Fam0024 | gb|EEW39187.1, gi|259037968, gnl|md5|32a172554267993fa002657b |
| 2e-30 | 4 | fig|983918.3.peg.2460 | Pseudomonas aeruginosa 138244 | Phage major capsid protein | gi|334840692, locus|PA13_12580, protein_id|EGM19339.1 |
| 3.0e-029 | 4 | fig|575586.4.peg.791 | Acinetobacter johnsonii SH046 | Phage major capsid protein | gnl|md5|b82761a00efa7c75def4eb81 |
| 5e-29 | 4 | fig|1029823.3.peg.3090 | Acinetobacter sp. P8-3-8 | Phage major capsid protein | |
| 2e-28 | 4 | fig|707241.3.peg.1144 | Sinorhizobium meliloti SM11 | Phage major capsid protein | gi|336032432, locus|SM11_chr1087, protein_id|AEH78364.1 |
| 1.3e-028 | 4 | fig|634176.4.peg.467 | Aggregatibacter aphrophilus NJ8700 | Phage major capsid protein | gb|ACS96912.1, geneID|8121932, gi|247533666, gi|251792277, gnl|md5|990c751cc3375d76a4547870, kegg|aap:NT05HA_0497, locus|NT05HA_0497, protein_id|YP_003006999.1, ref|YP_003006999.1, tr|C6AM50 |
| 2.7e-028 | 4 | fig|798130.4.peg.131 | Pseudomonas aeruginosa 39016 | Phage major capsid protein | |
| 4.7e-028 | 4 | fig|440085.6.peg.1533 | Methylobacterium chloromethanicum CM4 | Phage major capsid protein | InterPro:IPR006444, gb|ACK82464.1, geneID|7118789, gi|218521879, gi|218529576, gnl|md5|9a5006cabeab33b4dc2a41fa, img|641196109, kegg|mch:Mchl_1600, locus|Mchl_1600, protein_id|YP_002420392.1, ref|YP_002420392.1, tr|B7KSW2 |
| 1.4e-027 | 4 | fig|557722.3.peg.2606 | Pseudomonas aeruginosa LESB58 | Phage major capsid protein #Fam0024 | emb|CAW27268.1, geneID|7177024, gi|218771501, gi|218891275, gnl|md5|b8a0df8a40f2817a821daa4d, kegg|pag:PLES_25421, locus|PLES_25421, protein_id|YP_002440142.1, ref|YP_002440142.1, tr|B7UZW8 |
| 1e-26 | 4 | fig|412597.3.peg.3626 | Paracoccus sp. TRP | Phage major capsid protein | |
| 4.1e-064 | 3 | fig|257309.4.peg.192 | Corynebacterium diphtheriae NCTC 13129 | Phage major capsid protein # Fam0024 | cmr|NT01CD0211, emb|CAE48709.1, geneID|2650480, gi|38199087, gi|38232829, gnl|md5|94c044d25ad111a54288c8ea, img|637117426, kegg|cdi:DIP0205, locus|DIP0205, protein_id|NP_938596.1, ref|NP_938596.1, tr|Q6NK34 |
| 2.8e-057 | 3 | fig|525263.3.peg.131 | Corynebacterium lipophiloflavum DSM 44291 | Phage major capsid protein | gb|EEI16270.1, gi|227078307, gi|227549615, gnl|md5|515039660d71aeb3fa21bddb, ref|ZP_03979664.1, tr|C0XU08 |
| 1.9e-034 | 3 | fig|441165.3.peg.2095 | Burkholderia thailandensis TXDOH | Phage major capsid protein | CDD:68633, gi|167578770, gnl|md5|a5484356c19d0fdd22bc259a, locus|BthaT_010100011548, protein_id|ZP_02371644.1 |
| 8.4e-034 | 3 | fig|536230.4.peg.4967 | Burkholderia pseudomallei MSHR346 | Phage major capsid protein | gb|EEP49173.1, gi|234999749, gi|237507544, gnl|md5|f9df0feb90bf03584eed691b, locus|GBP346_B1203, protein_id|ZP_04520259.1, ref|ZP_04520259.1, tr|C4I4Z1 |
| 4.1e-032 | 3 | fig|211586.9.peg.2657 | Shewanella oneidensis MR-1 | Phage major capsid protein # Fam0024 | GO:0019038, SO_2963, cmr|SO_2963, gb|AAN55976.1, gb|AE015735_10, gi|24349071, gi|24374489, gnl|md5|8176179b7900191e05d9c5f7, img|637344774, kegg|son:SO_2963, ref|NP_718532.1, tr|Q8ED08 |
| 1.5e-029 | 3 | fig|596318.3.peg.1146 | Acinetobacter radioresistens SK82 | Phage major capsid protein | gb|EET82850.1, gi|255303650, gi|255319257, gnl|md5|0f2b36792fc3f02e4b10f8eb, locus|ACIRA0001_1644, protein_id|ZP_05360474.1, ref|ZP_05360474.1 |
| 1.4e-027 | 3 | fig|557722.4.peg.2618 | Pseudomonas aeruginosa LESB58 | Phage major capsid protein #Fam0024 | emb|CAW27268.1, geneID|7177024, gi|218771501, gi|218891275, gnl|md5|b8a0df8a40f2817a821daa4d, kegg|pag:PLES_25421, locus|PLES_25421, protein_id|YP_002440142.1, ref|YP_002440142.1, tr|B7UZW8 |
| 1.5e-082 | 2 | fig|411481.5.peg.1344 | Bifidobacterium adolescentis L2-32 | Phage major capsid protein #Fam0024 | gb|EDN83113.1, gi|154084068, gi|154487550, gnl|md5|ecdbce0a2480e28550b155f5, img|641040885, locus|BIFADO_01405, protein_id|ZP_02028957.1, ref|ZP_02028957.1, tr|A7A6C5 |
| 8.0e-076 | 2 | fig|640132.3.peg.1177 | Segniliparus rotundus DSM 44985 | Putative phage capsid protein | geneID|9179214, gi|296393583, gnl|md5|c805b26e9a375615c89f0687, locus|Srot_1164, protein_id|YP_003658467.1 |