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The SEED: an Annotation/Analysis Tool Provided by FIG
[ Essentiality Data | FIG Tutorials | Peer-to-peer Updates | Subsystem Update Queue | SEED Control Panel | PATRIC | SEED Wiki] [RAST | GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt ] SEED version cvs.1555556707 (Wed Apr 17 22:05:07 2019) on gum.mcs.anl.gov |
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| Sim. Sc. | Cluster Size | PEG | Genome | Function | Aliases |
|---|---|---|---|---|---|
| 5.6e-025 | 3 | fig|706434.3.peg.498 | Megasphaera micronuciformis F0359 | Phage exonuclease (EC 3.1.11.3) | |
| 2.5e-023 | 3 | fig|380703.7.peg.1091 | Aeromonas hydrophila subsp. hydrophila ATCC 7966 | Phage exonuclease (EC 3.1.11.3) | GO:0003677, cmr|AHA_1086, gb|ABK38298.1, geneID|4487282, gi|117561350, gi|117619943, gnl|md5|796a9e15420e6376eb31db11, img|639713664, kegg|aha:AHA_1086, locus|AHA_1086, protein_id|YP_855629.1, ref|YP_855629.1, tr|A0KH78 |
| 2e-21 | 3 | fig|998088.4.peg.3157 | Aeromonas veronii B565 | Protein gp47, recombination-related [Bacteriophage A118] | geneID|10489042, gi|330830825, locus|B565_3125, protein_id|YP_004393777.1 |
| 2.3e-026 | 2 | fig|665959.3.peg.650 | Bacillus sp. 2_A_57_CT2 | Protein gp47, recombination-related [Bacteriophage A118] | |
| 1.2e-025 | 2 | fig|458233.11.peg.1060 | Macrococcus caseolyticus JCSC5402 | Phage exonuclease (EC 3.1.11.3) | GO:0003677, GO:0004518, dbj|BAH17653.1, geneID|7390356, gi|222120318, gi|222151195, gnl|md5|f667e53359c7cb7f32aa4f88, kegg|mcl:MCCL_0946, locus|MCCL_0946, protein_id|YP_002560349.1, ref|YP_002560349.1, tr|B9EBP2 |
| 7.3e-025 | 2 | fig|864563.3.peg.997 | Selenomonas sp. oral taxon 149 str. 67H29BP | Phage-related protein predicted endonuclease-like | |
| 1.1e-024 | 2 | fig|546271.3.peg.514 | Selenomonas sputigena ATCC 35185 | Phage exonuclease (EC 3.1.11.3) | gnl|md5|a6b0088084ab10b6318f5740 |
| 1.1e-024 | 2 | fig|546271.5.peg.1380 | Selenomonas sputigena ATCC 35185 | Phage exonuclease (EC 3.1.11.3) | InterPro:IPR011335, InterPro:IPR011604, InterPro:IPR017482, InterPro:IPR019080, geneID|10497584, gi|330839191, locus|Selsp_1353, protein_id|YP_004413771.1 |
| 5.8e-024 | 2 | fig|544875.4.peg.2035 | Enterococcus faecium E1636 | phage-related protein | gi|294616162, gnl|md5|fa627f6cd34434be346131ac, locus|EfmE1636_2226, protein_id|ZP_06695961.1 |
| 7.1e-024 | 2 | fig|585503.3.peg.1664 | Selenomonas noxia ATCC 43541 | Phage-related protein predicted endonuclease-like | gnl|md5|30a333e197d033b250ab8953 |
| 7.2e-024 | 2 | fig|565660.4.peg.2312 | Enterococcus faecium 1,231,410 | phage-related protein | gnl|md5|70ad2d4ab5813954940cb0ca |
| 7.2e-024 | 2 | fig|565661.4.peg.2047 | Enterococcus faecium 1,231,408 | phage-related protein | gnl|md5|70ad2d4ab5813954940cb0ca |
| 1.4e-023 | 2 | fig|749520.3.peg.1568 | Enterococcus faecium TX0082 | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|314949131, locus|HMPREF9522_01657, protein_id|ZP_07852486.1 |
| 1.4e-023 | 2 | fig|749521.3.peg.1993 | Enterococcus faecium TX0133A | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|314952780, locus|HMPREF9523_02113, protein_id|ZP_07855756.1 |
| 1.4e-023 | 2 | fig|749522.3.peg.1285 | Enterococcus faecium TX0133a01 | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|314996160, locus|HMPREF9524_01347, protein_id|ZP_07861227.1 |
| 1.4e-023 | 2 | fig|749523.3.peg.2897 | Enterococcus faecium TX0133a04 | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|314940566, locus|HMPREF9525_03095, protein_id|ZP_07847702.1 |
| 1.4e-023 | 2 | fig|749524.3.peg.2356 | Enterococcus faecium TX0133B | phage-related protein | |
| 1.4e-023 | 2 | fig|749525.3.peg.1957 | Enterococcus faecium TX0133C | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|314943007, locus|HMPREF9527_02077, protein_id|ZP_07849812.1 |
| 2.1e-023 | 2 | fig|547468.4.peg.1618 | Enterococcus faecium U0317 | phage-related protein | gi|294622473, gnl|md5|4ceabcc5ed2e56525113bddc, locus|EfmU0317_1813, protein_id|ZP_06701495.1 |
| 2.1e-023 | 2 | fig|565656.3.peg.1639 | Enterococcus faecium 1,230,933 | phage-related protein | gnl|md5|4ceabcc5ed2e56525113bddc |
| 2.1e-023 | 2 | fig|565657.5.peg.2632 | Enterococcus faecium 1,231,502 | phage-related protein | gnl|md5|4ceabcc5ed2e56525113bddc |
| 8.7e-023 | 2 | fig|563191.3.peg.143 | Acidaminococcus sp. D21 | Protein gp47, recombination-related [Bacteriophage A118] | gi|227498419, gnl|md5|7885c7e7ab4cc1f2b26274ff, locus|ACDG_00154, protein_id|ZP_03928565.1 |
| 8.7e-023 | 2 | fig|568816.4.peg.1210 | Acidaminococcus intestini RyC-MR95 | phage-related protein | gi|350279288, locus|Acin_1253, protein_id|AEQ22478.1 |
| 3.0e-022 | 2 | fig|565659.3.peg.516 | Enterococcus faecium 1,141,733 | phage-related protein | gb|EEV50258.1, gi|257823326, gi|257887272, gnl|md5|2b543154d3230fba6b77d2c9, ref|ZP_05666925.1 |
| 4.1e-022 | 2 | fig|535205.4.peg.1570 | Enterococcus faecium E1071 | phage-related protein | gi|293568944, gnl|md5|9712cb1d2ccd410378aa599c, locus|EfmE1071_1718, protein_id|ZP_06680257.1 |
| 4.8e-022 | 2 | fig|553209.3.peg.1336 | Enterococcus faecalis TUSoD Ef11 | phage-related protein | gb|EEQ22377.1, gi|238829981, gi|238857375, gnl|md5|3742191c8eadf2c9b0361ee2, locus|ENTFA0001_2047, protein_id|ZP_04647616.1, ref|ZP_04647616.1, tr|C4VG96 |
| 4.8e-022 | 2 | fig|749506.3.peg.2737 | Enterococcus faecalis TX0411 | phage-related protein | |
| 4.8e-022 | 2 | fig|749510.3.peg.1985 | Enterococcus faecalis TX0645 | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|315161423, locus|HMPREF9513_02105, protein_id|EFU05440.1 |
| 4.8e-022 | 2 | fig|749511.3.peg.1418 | Enterococcus faecalis TX0855 | phage-related protein | |
| 5.2e-022 | 2 | fig|565639.4.peg.1185 | Enterococcus faecalis T8 | phage-related protein | gb|EEU18207.1, gb|EEU26193.1, gb|EEU74735.1, gb|EEU85638.1, gi|256599031, gi|256619504, gi|256711151, gi|256853545, gi|256987433, gi|256999118, gi|257079403, gi|257090306, gnl|md5|044530a062377cd80c0d285d, locus|EFYG_02883, protein_id|ZP_05558911.1, ref|ZP_05476350.1, ref|ZP_05558911.1, ref|ZP_05573764.1, ref|ZP_05584667.1 |
| 5.2e-022 | 2 | fig|565642.4.peg.2455 | Enterococcus faecalis ATCC 4200 | phage-related protein | gb|EEU18207.1, gb|EEU26193.1, gb|EEU74735.1, gb|EEU85638.1, gi|256599031, gi|256619504, gi|256711151, gi|256853545, gi|256987433, gi|256999118, gi|257079403, gi|257090306, gnl|md5|044530a062377cd80c0d285d, ref|ZP_05476350.1, ref|ZP_05558911.1, ref|ZP_05573764.1, ref|ZP_05584667.1 |
| 5.2e-022 | 2 | fig|565644.5.peg.1580 | Enterococcus faecalis CH188 | phage-related protein | gb|EEU18207.1, gb|EEU26193.1, gb|EEU74735.1, gb|EEU85638.1, gi|256599031, gi|256619504, gi|256711151, gi|256853545, gi|256987433, gi|256999118, gi|257079403, gi|257090306, gnl|md5|044530a062377cd80c0d285d, ref|ZP_05476350.1, ref|ZP_05558911.1, ref|ZP_05573764.1, ref|ZP_05584667.1 |
| 5.2e-022 | 2 | fig|565648.4.peg.1711 | Enterococcus faecalis JH1 | phage-related protein | gb|EEU18207.1, gb|EEU26193.1, gb|EEU74735.1, gb|EEU85638.1, gi|256599031, gi|256619504, gi|256711151, gi|256853545, gi|256987433, gi|256999118, gi|257079403, gi|257090306, gnl|md5|044530a062377cd80c0d285d, ref|ZP_05476350.1, ref|ZP_05558911.1, ref|ZP_05573764.1, ref|ZP_05584667.1 |
| 5.2e-022 | 2 | fig|749492.3.peg.2676 | Enterococcus faecalis TX2141 | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|315143455, locus|HMPREF9495_02796, protein_id|EFT87471.1 |
| 5.2e-022 | 2 | fig|749493.3.peg.2335 | Enterococcus faecalis TX4000 | phage-related protein | gi|315028551, locus|HMPREF9496_02480, protein_id|EFT40483.1 |
| 5.2e-022 | 2 | fig|749494.3.peg.2772 | Enterococcus faecalis TX4244 | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|315146195, locus|HMPREF9497_02951, protein_id|EFT90211.1 |
| 5.2e-022 | 2 | fig|749500.3.peg.299 | Enterococcus faecalis TX0043 | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|315157226, locus|HMPREF9503_00309, protein_id|EFU01243.1 |
| 5.2e-022 | 2 | fig|749508.3.peg.2929 | Enterococcus faecalis TX0630 | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|315576738, locus|HMPREF9511_03150, protein_id|EFU88929.1 |
| 5.2e-022 | 2 | fig|749509.3.peg.564 | Enterococcus faecalis TX0635 | phage-related protein | gi|312902808, locus|HMPREF9512_00586, protein_id|ZP_07762012.1 |
| 5.2e-022 | 2 | fig|936153.3.peg.2333 | Enterococcus faecalis 62 | phage-related protein | PFAM:PF09588.3, gi|323481163, locus|EF62_2392, protein_id|ADX80602.1 |
| 5.9e-022 | 2 | fig|749507.3.peg.9 | Enterococcus faecalis TX0470 | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|312899200, locus|HMPREF9510_00009, protein_id|ZP_07758538.1 |
| 5.9e-022 | 2 | fig|749518.3.peg.1463 | Enterococcus faecalis TX2134 | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|307275967, locus|HMPREF9521_01593, protein_id|ZP_07557100.1 |
| 2e-21 | 2 | fig|749517.3.peg.3150 | Enterococcus faecalis TX1467 | phage-related protein | InterPro:IPR017482, InterPro:IPR019080, gi|329568794, locus|HMPREF9520_03426, protein_id|EGG50594.1 |
| 8.1e-022 | 2 | fig|525278.3.peg.113 | Enterococcus faecalis TX1322 | phage-related protein | GO:0003677, GO:0004519, gb|EEN75478.1, gi|229309491, gi|229545384, gnl|md5|46b68145abe171fb61e2071f, ref|ZP_04434109.1, tr|C2DBJ1 |