SEED Viewer version 2.0

Welcome to the SEED Viewer - a read-only browser of the curated SEED data.
For more information about The SEED please visit theSEED.org.
For daily updates on SEED activity visit the Daily SEED

Subsystem: Phenylpropionate Degradation

This subsystem's description is:

Variant code:
1-complete set,
2-doubtfull cases

For more information, please check out the description and the additional notes tabs, below

Diagram	Functional Roles	Subsystem Spreadsheet	Description	Scenarios
Oops! We thought there was a diagram here, but we can't find it. Sorry Group Alias Abbrev. Functional Role Reactions Scenario Reactions GO Literature Subsets Coloring collapsed expanded do not color by cluster by attribute: BS_essential_Kobayashi EC_contribute_to_fitness EC_essential_Blattner EC_essential_Keio EC_essential_Shigen Essential_Gene_Sets_Bacterial HP_candidate_essential_Salama MG_essential_Hutchison_2006 MT_contribute_to_fitness_Rubin PA_candidate_essential_Jacobs PA_essential_PA14_PAO1_Liberati SA_essential_Forsyth SA_essential_Ji SA_essential_merged_Forsyth_and_Ji SP_essential_merged SP_essential_Song SP_essential_Thanassi ST_essential_Knuth CELLO cell_surface established_antibiotic_inhibitor established_antibiotic_target GENE3D iedb_epitopelinearsequence iedb_epitopename in_phage isoelectric_point microarray_sigmaB_regulon molecular_weight mouse_passage_in_THY_18_hours_change PANTHER PDB Phobius PRINTS PROFILE PSORT PSORT_score secreted_protein_signal SignalP similar_to_human SMART SSF structure TIGRFAMs toxin Vibrio_Fe-regulated_Mey2005 Vibrio_Fur-regulated_Mey2005 virulence_associated virulence_associated_by_adhesion_properties_of_mutants virulence_associated_by_evolution_of_epidemic_microarray virulence_associated_by_mutagenesis_and_nematode_killing virulence_associated_by_Rot_expression_analysis virulence_associated_by_screening_mutants_in_murine_model virulence_associated_by_site_specific_mutation virulence_associated_by_vaccination    display  items per page «first  «prev displaying 1 - 106 of 106 next»  last» Taxonomy  Pattern  Organism  Domain Variant Variant Codes -1 Subsystem is not present 0 presence unknown * computer assessed variant (not confirmed by annotator) others functional variant [?]  =!= active PPDb PPDa DCDCD *PPD PPDH PPAT *PPD 4: PPH 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 6: PPD 3-phenylpropionate dioxygenase ferredoxin--NAD(+) reductase component (EC 1.18.1.3) 7: PPDF 3-phenylpropionate dioxygenase ferredoxin subunit 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase (EC 1.3.1.-) Probable 3-phenylpropionic acid transporter 3-phenylpropionate dioxygenase, beta subunit (EC 1.14.12.19) 3-phenylpropionate dioxygenase, alpha subunit (EC 1.14.12.19) 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25) «first  «prev displaying 1 - 106 of 106 next»  last» Variant code: 1-complete set, 2-doubtfull cases Currently selected organism: Escherichia coli 2731150 (open scenarios overview page for organism) Scenario Input Compounds Output Compounds Paint on Map Status in 1116007.3 Phenylalanine metabolism (link to KEGG)   PPDa: 3-phenylpropionate dioxygenase, alpha subunit (EC 1.14.12.19) (fig|1116007.3.peg.3270) PPDb: 3-phenylpropionate dioxygenase, beta subunit (EC 1.14.12.19) (fig|1116007.3.peg.3271) No other subsystems use this compound as a scenario input or output Scenario input for: Dihydroxycinnamate to Fumarate and Pyruvate (subsystem: Central meta-cleavage pathway of aromatic compound degradation) Scenario output for: Hydroxycinnamate to Dihydroxycinnamate (subsystem: Central meta-cleavage pathway of aromatic compound degradation) Scenario input for: Dihydroxyphenylpropanoate to Fumarate and Pyruvate (subsystem: Central meta-cleavage pathway of aromatic compound degradation) Scenario output for: Hydroxyphenylpropanoate to Dihydroxyphenylpropanoate (subsystem: Central meta-cleavage pathway of aromatic compound degradation) PPDH: 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase (EC 1.3.1.-) (fig|1116007.3.peg.3273)