SEED Viewer version 2.0

Welcome to the SEED Viewer - a read-only browser of the curated SEED data.
For more information about The SEED please visit theSEED.org.
For daily updates on SEED activity visit the Daily SEED

Subsystem: Late competence

This subsystem's description is:

For more information, please check out the description and the additional notes tabs, below

Diagram	Functional Roles	Subsystem Spreadsheet	Additional Notes
Oops! We thought there was a diagram here, but we can't find it. Sorry Group Alias Abbrev. Functional Role Reactions Scenario Reactions GO Literature Subsets Coloring collapsed expanded do not color by cluster by attribute: BS_essential_Kobayashi EC_contribute_to_fitness EC_essential_Blattner EC_essential_Keio EC_essential_Shigen Essential_Gene_Sets_Bacterial HP_candidate_essential_Salama MG_essential_Hutchison_2006 MT_contribute_to_fitness_Rubin PA_candidate_essential_Jacobs PA_essential_PA14_PAO1_Liberati SA_essential_Forsyth SA_essential_Ji SA_essential_merged_Forsyth_and_Ji SP_essential_merged SP_essential_Song SP_essential_Thanassi ST_essential_Knuth CELLO cell_surface established_antibiotic_inhibitor established_antibiotic_target GENE3D iedb_epitopelinearsequence iedb_epitopename in_phage isoelectric_point microarray_sigmaB_regulon molecular_weight mouse_passage_in_THY_18_hours_change PANTHER PDB Phobius PRINTS PROFILE PSORT PSORT_score secreted_protein_signal SignalP similar_to_human SMART SSF structure TIGRFAMs toxin Vibrio_Fe-regulated_Mey2005 Vibrio_Fur-regulated_Mey2005 virulence_associated virulence_associated_by_adhesion_properties_of_mutants virulence_associated_by_evolution_of_epidemic_microarray virulence_associated_by_mutagenesis_and_nematode_killing virulence_associated_by_Rot_expression_analysis virulence_associated_by_screening_mutants_in_murine_model virulence_associated_by_site_specific_mutation virulence_associated_by_vaccination    display  items per page «first  «prev displaying 1 - 366 of 366 next»  last» Taxonomy  Pattern  Organism  Domain Variant Variant Codes -1 Subsystem is not present 0 presence unknown * computer assessed variant (not confirmed by annotator) others functional variant [?]  =!= active ComC ComER ComEA ComEB ComEC ComFA ComFC ComGA ComGB ComGC *ComGD *ComGE *ComGF *ComGG DnaBP Late competence protein ComC, processing protease Late competence protein ComER, similarity with Pyrroline-5-carboxylate reductase Late competence protein ComEA, DNA receptor Late competence protein ComEB Late competence protein ComEC, DNA transport ComF operon protein A, DNA transporter ATPase ComF operon protein C Late competence protein ComGA, access of DNA to ComEA Late competence protein ComGB, access of DNA to ComEA Late competence protein ComGC, access of DNA to ComEA, FIG007487 *ComGD 11: ComGD Late competence protein ComGD, access of DNA to ComEA, FIG012777 12: ComGD1 Late competence protein ComGD, access of DNA to ComEA, FIG038316 *ComGE 13: ComGE Late competence protein ComGE, FIG015564 14: ComGE1 Late competence protein ComGE, FIG015513 15: ComGE2 Late competence protein ComGE, FIG018915 16: ComGE3 Late competence protein ComGE, FIG075573 *ComGF 17: ComGF Late competence protein ComGF, access of DNA to ComEA, FIG012620 18: ComGF1 Late competence protein ComGF, access of DNA to ComEA, FIG017774 *ComGG 19: ComGG Late competence protein ComGG, FIG007920 20: ComGG1 Late competence protein ComGG, FIG028917 21: ComGG2 Late competence protein ComGG, FIG068335 DNA binding protein, FIG046916 «first  «prev displaying 1 - 366 of 366 next»  last» This SS is a merger and extension of the subsystems "gram plus late competence" by alexS and "Gram Positive Competence" by RamyA. Bacillus cereus G9241 is a draft genome with 207 contigs. fig|269801.1.peg.3909 and 3910 are the real ComFA & ComFC pegs 4727/4726 and 2762/2763 are on redundant contigs.