Blast ProDom Result
 Please waithttp://prodes.toulouse.inra.fr/prodom/current. Computing. |
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| database: | multiple alignments |
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| Program: | ncbi-blastp |
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| Matrix: | BLOSUM62 |
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| Expect: | .01 |
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| Filter: | seq |
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Graphical results and forms to other applications
The following is the graphical representation of the HSP found by BLAST.
Please note that HSPs are sorted from highest to lowest scores,
so that lower scoring HSPs may be hidden.
Align subsequence with ProDom domains, using Multalin
Domain 3D modelling using Swiss-Model
Domain 3D modelling using Geno3D
HSP Results
Warning: Original output has been filtered to yield non-redundant similarities
blastp 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
_quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs_quot;, Nucleic Acids Res. 25:3389-3402.
Query: unkwown
(404 letters)
Database: prodom2010.1 multiple alignments
45,292,438 sequences; 2,147,483,647 total letters
ProDom domains producing High-scoring Segment Pairs:
Position ProDom domain Score E value
1-54 #PD526846 212 2e-18
1-38 #PDC6Y626 140 2e-08
4-202 #PDD351N1 110 0.002
36-65 #PDC653O7 143 5e-09
39-102 #PD786156 303 5e-31
47-71 #PDC69598 102 0.002
57-201 #PDC7L8T4 173 5e-12
69-99 #PDC650L5 108 0.0003
71-118 #PD925716 101 0.004
71-137 #PDA1V4U2 205 2e-17
71-117 #PDB3L707 121 6e-06
74-128 #PDA1P539 101 0.004
74-114 #PDB5H8I3 175 3e-13
76-131 #PDA210O4 125 3e-06
88-145 #PDD9Q131 101 0.004
90-185 #PDB003Y9 101 0.005
101-161 #PDA2K3G9 203 4e-17
106-158 #PDC66453 165 9e-12
106-202 #PDA857M8 203 2e-16
116-155 #PDC657H6 177 1e-13
117-162 #PDA026V7 149 1e-09
118-162 #PD414066 184 2e-14
130-190 #PDA346P1 106 0.001
131-202 #PDB0H284 99 0.009
142-199 #PDB1O9V8 99 0.008
143-203 #PDC677U8 170 2e-12
154-202 #PDC422M4 99 0.006
164-203 #PD482214 182 3e-14
170-200 #PDB021T5 97 0.009
172-203 #PD709608 104 0.001
260-305 #PDA9T8H7 200 1e-16
268-307 #PD827414 189 2e-15
311-397 #PDA1F5E7 377 3e-41
325-393 #PD387799 289 4e-29
>PDA1F5E7 (Closest domain: C4Z926_EUBR3 324-410)
Number of domains in family: 442
Commentary (automatic):
SUBNAME: FULL=THREONINE DEHYDRATASE LYASE EC=4.3.1.19 AMMONIA-LYASE FULL=L-THREONINE REFERENCE FULL=PUTATIVE THREONINE
Length = 87
Score = 377 (149.8 bits), Expect = 3e-41
Identities = 68/87 (78%), Positives = 81/87 (93%)
Query: 311 SIVQHGLIQRDRIFSVSVLLPDKPGELVQVAQTIAEAQGNVIKLEHNQFVSTNRNAAVEL 370
S+VQ GLI RDRIF+VSVLLPDKPGEL +V+QT+A+ QGNVIKLEHNQFV+TNR+AAVEL
Sbjct: 324 SVVQQGLIFRDRIFTVSVLLPDKPGELAKVSQTLADVQGNVIKLEHNQFVTTNRSAAVEL 383
Query: 371 RITMEAFGTEHKQEILKALEKKGYRPR 397
RIT+E FGTEHK++I+ ALEKKGY+PR
Sbjct: 384 RITLECFGTEHKEQIIAALEKKGYKPR 410
>PD786156 (Closest domain: G2SXN8_ROSHA 39-102)
Number of domains in family: 1947
Commentary (automatic):
SUBNAME: FULL=THREONINE DEHYDRATASE LYASE EC=4.3.1.19 BIOSYNTHETIC DEHYDRATASE AMMONIA-LYASE THREONINE FULL=L-THREONINE
Length = 64
Score = 303 (121.3 bits), Expect = 5e-31
Identities = 56/64 (87%), Positives = 60/64 (93%)
Query: 39 LKPENMQHTGAYKIRGAYYKISTLSDEERGRGLITASAGNHAQGVAFAAKKFGCKAVIVM 98
LKPENMQ TGAYK+RGAYYKISTLSDEER +GLITASAGNHAQGVA+AAK +GCKAVIVM
Sbjct: 39 LKPENMQFTGAYKVRGAYYKISTLSDEERAKGLITASAGNHAQGVAYAAKCYGCKAVIVM 98
Query: 99 PTVT 102
PT T
Sbjct: 99 PTTT 102
>PD387799 (Closest domain: G2SXN8_ROSHA 325-393)
Number of domains in family: 477
Commentary (automatic):
SUBNAME: KINASE FULL=GTP TRANSFERASE EC=2.7.6.5 PYROPHOSPHOKINASE SYNTHETASE FULL=PPPGPP SPOT/RELA I
Length = 69
Score = 289 (115.9 bits), Expect = 4e-29
Identities = 54/69 (78%), Positives = 64/69 (92%)
Query: 325 SVSVLLPDKPGELVQVAQTIAEAQGNVIKLEHNQFVSTNRNAAVELRITMEAFGTEHKQE 384
+VSVLLPDKPGEL +V+ IA QGNVIKLEHNQFV+TNR+AAVELRIT+E+FGTEHK++
Sbjct: 325 TVSVLLPDKPGELSKVSAAIAAEQGNVIKLEHNQFVTTNRSAAVELRITLESFGTEHKKQ 384
Query: 385 ILKALEKKG 393
I+KALEKKG
Sbjct: 385 IMKALEKKG 393
>PD526846 (Closest domain: D4J3Q9_BUTFI 1-54)
Number of domains in family: 939
Commentary (automatic):
SUBNAME: FULL=THREONINE DEHYDRATASE LYASE EC=4.3.1.19 AMMONIA-LYASE FULL=L-THREONINE CATABOLIC THREONINE BETA
Length = 54
Score = 212 (86.3 bits), Expect = 2e-18
Identities = 39/54 (72%), Positives = 48/54 (88%)
Query: 1 MMTLEKFEEASELVKKVTNSTKLVYSDYLSEQSGGKVYLKPENMQHTGAYKIRG 54
M+TL+KFEEAS++V +VT+ TKL+YSDY SE+SG VYLKPENMQ TGAYK+RG
Sbjct: 1 MLTLDKFEEASKIVTEVTHETKLIYSDYFSEKSGNDVYLKPENMQLTGAYKLRG 54
>PDA1V4U2 (Closest domain: A8MDC1_CALMQ 86-152)
Number of domains in family: 465
Commentary (automatic):
SUBNAME: LYASE AMMONIA-LYASE FULL=DIAMINOPROPIONATE EC=4.3.1.15 FULL=PUTATIVE FULL=THREONINE SYNTHASE DEHYDRATASE EC=4.3.1.19
Length = 67
Score = 205 (83.6 bits), Expect = 2e-17
Identities = 39/67 (58%), Positives = 50/67 (74%)
Query: 71 LITASAGNHAQGVAFAAKKFGCKAVIVMPTVTPLIKVNRTKSYGAEVILHGDVYDDAYAY 130
++TASAGNHAQGVA+ AK +G K+ IVMP TP IK++ T+ YGAEVIL G Y +A Y
Sbjct: 86 VVTASAGNHAQGVAYVAKIYGLKSTIVMPKYTPWIKISNTRKYGAEVILEGQSYYEAEKY 145
Query: 131 ACELAEK 137
A EL ++
Sbjct: 146 AIELTKE 152
>PDA2K3G9 (Closest domain: F2JGM5_CELLD 106-167)
Number of domains in family: 166
Commentary (automatic):
SUBNAME: LYASE AMMONIA-LYASE FULL=DIAMINOPROPIONATE FULL=PUTATIVE EC=4.3.1.15 DEHYDRATASE UNCHARACTERIZED ALTNAME: EC=4.3.1.19
Length = 62
Score = 203 (82.8 bits), Expect = 4e-17
Identities = 37/61 (60%), Positives = 47/61 (77%)
Query: 101 VTPLIKVNRTKSYGAEVILHGDVYDDAYAYACELAEKEGYTFVHPFNDIDVATGQGTIAM 160
TPLIKV TK++GA V+L G VYD+AY A +L ++ GYTF+HPFND +V GQGTIA+
Sbjct: 107 TTPLIKVQATKNWGAHVVLAGQVYDEAYETAKKLEQENGYTFIHPFNDKEVMAGQGTIAL 166
Query: 161 E 161
E
Sbjct: 167 E 167
>PDA857M8 (Closest domain: D1C1H4_SPHTD 113-225)
Number of domains in family: 57
Commentary (automatic):
SUBNAME: BETA SUBUNIT FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT LYASE FULL=THREONINE FULL=PUTATIVE EC=4.3.1.19 DEHYDRATASE UNCHARACTERIZED
Length = 113
Score = 203 (82.8 bits), Expect = 2e-16
Identities = 40/97 (41%), Positives = 63/97 (64%)
Query: 106 KVNRTKSYGAEVILHGDVYDDAYAYACELAEKEGYTFVHPFNDIDVATGQGTIAMEIVQE 165
KV + GAEV+L G +D+A A E AE++G ++H N+ D+ G GT A+E+++
Sbjct: 116 KVASMRRLGAEVVLTGRDFDEARLAAEERAERDGMRYIHSANEPDLIAGVGTYALEMIEA 175
Query: 166 LPTVDYILVPIGGGGLVSGVATLAKMLNPKIKVIGVE 202
+P +D ++VP+G G V G A + K +NP I+VIGV+
Sbjct: 176 VPDLDTVIVPVGAGSGVCGTAIVMKAVNPAIRVIGVQ 212
>PDA9T8H7 (Closest domain: C4Z0E4_EUBE2 249-307)
Number of domains in family: 658
Commentary (automatic):
SUBNAME: FULL=THREONINE DEHYDRATASE LYASE EC=4.3.1.19 BIOSYNTHETIC DEHYDRATASE AMMONIA-LYASE FULL=L-THREONINE DEAMINASE
Length = 59
Score = 200 (81.6 bits), Expect = 1e-16
Identities = 39/46 (84%), Positives = 42/46 (91%)
Query: 260 IGAFLDMVENHKMIVENSGLLSVAALKQLDCKGKKVVCVLSGGNMD 305
I AFLDMVENHKMIVENSGLL+VAALKQLD K KK+V +LSGGNMD
Sbjct: 262 IVAFLDMVENHKMIVENSGLLTVAALKQLDVKDKKIVSILSGGNMD 307
>PD827414 (Closest domain: E0RV38_BUTPB 273-312)
Number of domains in family: 1184
Commentary (automatic):
SUBNAME: DEHYDRATASE FULL=THREONINE LYASE EC=4.3.1.19 AMMONIA-LYASE FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT BETA SUBUNIT FULL=L-THREONINE
Length = 40
Score = 189 (77.4 bits), Expect = 2e-15
Identities = 35/40 (87%), Positives = 38/40 (95%), Gaps = 1/40 (2%)
Query: 268 ENHKMIVENSGLLSVAALKQLDCKGKKVVCVLSGGNMDVI 307
ENHKM+VENSGLLSVAALKQLDCK KK+ CVLSGGNMD+I
Sbjct: 273 ENHKMVVENSGLLSVAALKQLDCKDKKIACVLSGGNMDII 312
>PD414066 (Closest domain: C4Z926_EUBR3 131-176)
Number of domains in family: 1521
Commentary (automatic):
SUBNAME: FULL=THREONINE DEHYDRATASE LYASE EC=4.3.1.19 BIOSYNTHETIC AMMONIA-LYASE FULL=L-THREONINE DEHYDRATASE DEAMINASE
Length = 46
Score = 184 (75.5 bits), Expect = 2e-14
Identities = 35/45 (77%), Positives = 41/45 (91%), Gaps = 1/45 (2%)
Query: 118 ILHGDVYDDAYAYACELAEKEGYTFVHPFNDIDVATGQGTIAMEI 162
+L+GDVYD+A A A ELAEKEGYTF+HPF+D+ VATGQGTIAMEI
Sbjct: 131 VLYGDVYDEACAKAYELAEKEGYTFIHPFDDLAVATGQGTIAMEI 175
>PD482214 (Closest domain: D9R050_CLOSW 164-215)
Number of domains in family: 1906
Commentary (automatic):
SUBNAME: FULL=THREONINE DEHYDRATASE LYASE EC=4.3.1.19 BIOSYNTHETIC AMMONIA-LYASE FULL=PUTATIVE DEHYDRATASE FULL=L-THREONINE
Length = 52
Score = 182 (74.7 bits), Expect = 3e-14
Identities = 35/40 (87%), Positives = 38/40 (95%), Gaps = 1/40 (2%)
Query: 164 QELPTVDYILVPIGGGGLVSGVATLAKMLNPKIKVIGVEP 203
+ELPTVDYILVPIGGGGL +GV+ LAKMLNPKIKVIGVEP
Sbjct: 164 KELPTVDYILVPIGGGGLCTGVSVLAKMLNPKIKVIGVEP 203
>PDC657H6 (Closest domain: A6LTQ6_CLOB8 116-155)
Number of domains in family: 135
Commentary (automatic):
SUBNAME: FULL=THREONINE LYASE EC=4.3.1.19 DEHYDRATASE AMMONIA-LYASE FULL=L-THREONINE BIOSYNTHETIC EC=4.3.1.17 DEHYDRATASE
Length = 40
Score = 177 (72.8 bits), Expect = 1e-13
Identities = 31/40 (77%), Positives = 37/40 (92%), Gaps = 1/40 (2%)
Query: 116 EVILHGDVYDDAYAYACELAEKEGYTFVHPFNDIDVATGQ 155
EVILHGDVYD+A YA +LAE+EGYTF+HPF+D+DVATGQ
Sbjct: 116 EVILHGDVYDEACNYALKLAEEEGYTFIHPFDDLDVATGQ 155
>PDB5H8I3 (Closest domain: A6LTQ6_CLOB8 74-114)
Number of domains in family: 262
Commentary (automatic):
SUBNAME: DEHYDRATASE FULL=THREONINE LYASE EC=4.3.1.19 FULL=PUTATIVE BETA FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT SUBUNIT AMMONIA-LYASE
Length = 41
Score = 175 (72.0 bits), Expect = 3e-13
Identities = 32/41 (78%), Positives = 37/41 (90%), Gaps = 1/41 (2%)
Query: 74 ASAGNHAQGVAFAAKKFGCKAVIVMPTVTPLIKVNRTKSYG 114
ASAGNHAQGVA+AAK + KA+IVMPT TPL+KVNRTK+YG
Sbjct: 74 ASAGNHAQGVAYAAKAYNTKAIIVMPTTTPLMKVNRTKAYG 114
>PDC7L8T4 (Closest domain: F4X1E4_ACREC 167-321)
Number of domains in family: 8
Commentary (automatic):
SUBNAME: SYNTHETASE AMINOACYL-TRNA FULL=PUTATIVE UNCHARACTERIZED NUCLEOTIDE-BINDING FULL=BIFUNCTIONAL ATP-BINDING LIGASE BIOSYNTHESIS
Length = 155
Score = 173 (71.2 bits), Expect = 5e-12
Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 57 YKISTLSDEERGRGLITASAGNHAQGVAFAAKKFGCKAVIVMPTVTPLIKVNRTKSYG-A 115
Y + LS E++ +G++T S+G+ A + +F +V+PT T K+ ++Y +
Sbjct: 167 YSLLHLSKEQKCKGVVTISSGSFAFILCHYTHRFKIPVTVVLPTTTLEEKIKMYQTYPLS 226
Query: 116 EVILHGDVYDDAYAYACELAEKEGYTFVHPFNDIDVATGQGTIAMEIVQELPTVDYILVP 175
VI+ GD +A+ A ++A +E ++ + ++ GQ T+ +EIV++ +D +L+P
Sbjct: 227 RVIVRGDTLLEAHYNALDIAMREDLFYLDGNDHPNMIIGQATLGIEIVRQQSQIDVVLLP 286
Query: 176 --IGGGGLVSGVATLAKMLNPKIKVIGV 201
I G GL + +A K N KI VI +
Sbjct: 287 TTIKGCGLTTAIAIAIKGCNSKITVIHI 314
>PDC677U8 (Closest domain: G0QLH3_ICHMG 45-113)
Number of domains in family: 81
Commentary (automatic):
SUBNAME: FULL=THREONINE DEHYDRATASE LYASE EC=4.3.1.19 BIOSYNTHETIC DEHYDRATASE THREONINE FULL=PUTATIVE ILVA
Length = 69
Score = 170 (70.1 bits), Expect = 2e-12
Identities = 31/64 (48%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
Query: 143 VHPFNDIDVATGQGTIAMEIVQELPT---VDYILVPIGGGGLVSGVATLAKMLNPKIKVI 199
VHP+ND V GQGTI++EI +++ + +D+I+VP+GGGGL+SG K ++PK KV+
Sbjct: 46 VHPYNDFAVIQGQGTISLEIFEQICSENFIDFIIVPVGGGGLLSGTCIATKGISPKTKVV 105
Query: 200 GVEP 203
EP
Sbjct: 106 AAEP 109
>PDC66453 (Closest domain: F8DDT5_HALXS 115-169)
Number of domains in family: 110
Commentary (automatic):
SUBNAME: FULL=THREONINE DEHYDRATASE LYASE EC=4.3.1.19 BETA SUBUNIT FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT FULL=PUTATIVE AMMONIA-LYASE
Length = 55
Score = 165 (68.2 bits), Expect = 9e-12
Identities = 30/53 (56%), Positives = 40/53 (75%), Gaps = 3/53 (5%)
Query: 106 KVNRTKSYGAEVILHGDVYDDAYAYACELAEKEGYTFVHPFNDIDVATGQGTI 158
K+ T+ YGAEVI+ GD+Y+ +YAYA E A++ G TFVHPF+D + GQGTI
Sbjct: 116 KIEATRGYGAEVIVEGDIYERSYAYALERADETGETFVHPFDDEAIVAGQGTI 168
>PDA026V7 (Closest domain: D9RYW0_THEOJ 118-163)
Number of domains in family: 680
Commentary (automatic):
SUBNAME: DEHYDRATASE FULL=THREONINE LYASE EC=4.3.1.19 FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT BETA SUBUNIT FULL=PUTATIVE AMMONIA-LYASE
Length = 46
Score = 149 (62.0 bits), Expect = 1e-09
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 4/46 (8%)
Query: 117 VILHGDVYDDAYAYACELAEKEGYTFVHPFNDIDVATGQGTIAMEI 162
V+LHG VYD+AYA A ++ E+ G TF+HPFND V GQGTI +EI
Sbjct: 118 VVLHGSVYDEAYAMAKKIQEETGATFIHPFNDPLVIAGQGTIGLEI 163
>PDC653O7 (Closest domain: D9R050_CLOSW 36-65)
Number of domains in family: 155
Commentary (automatic):
SUBNAME: DEHYDRATASE FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT BETA SUBUNIT LYASE FULL=THREONINE FULL=PUTATIVE DEPENDENT FULL=PYRIDOXAL-PHOSPHATE
Length = 30
Score = 143 (59.7 bits), Expect = 5e-09
Identities = 26/30 (86%), Positives = 28/30 (93%), Gaps = 1/30 (3%)
Query: 36 KVYLKPENMQHTGAYKIRGAYYKISTLSDE 65
KVY KPENMQ+TGAYK+RGAYYKISTLS E
Sbjct: 36 KVYFKPENMQYTGAYKVRGAYYKISTLSQE 65
>PDC6Y626 (Closest domain: C4Z926_EUBR3 14-51)
Number of domains in family: 14
Commentary (automatic):
SUBNAME: FULL=THREONINE DEHYDRATASE EC=4.3.1.19 LYASE AMMONIA-LYASE FULL=L-THREONINE DEHYDRATASE FULL=ILVE1 FULL=PUTATIVE
Length = 38
Score = 140 (58.5 bits), Expect = 2e-08
Identities = 27/38 (71%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
Query: 1 MMTLEKFEEASELVKKVTNSTKLVYSDYLSEQSGGKVY 38
M+TL+KFEEASE VK+VT TKL+YSD+LS+Q+G KVY
Sbjct: 14 MLTLDKFEEASEKVKEVTLETKLIYSDFLSDQTGNKVY 51
>PDA210O4 (Closest domain: F0ZP75_DICPU 85-141)
Number of domains in family: 232
Commentary (automatic):
SUBNAME: DEHYDRATASE FULL=PUTATIVE FULL=L-SERINE LYASE UNCHARACTERIZED EC=4.3.1.19 EC=4.3.1.17 BETA FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT
Length = 57
Score = 125 (52.8 bits), Expect = 3e-06
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 7/56 (12%)
Query: 76 AGNHAQGVAFAAKKFGCKAVIVMPTVTPLIKVNRTKSYGAEVILHGDVYDDAYAYA 131
GN + VA+A +K G K IV+PT P V + + GA VI+HG+++DDA + A
Sbjct: 85 GGNAGKSVAYAGRKLGIKTTIVLPTTIPEETVEKIRDEGANVIVHGNIWDDADSLA 140
>PDB3L707 (Closest domain: D8HM05_AMYMU 73-119)
Number of domains in family: 12
Commentary (automatic):
SUBNAME: SCAFFOLD BIOSYNTHESIS FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT REFERENCE FULL=PUTATIVE UNCHARACTERIZED BETA SUBUNIT CYSTEINE
Length = 47
Score = 121 (51.2 bits), Expect = 6e-06
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 71 LITASAGNHAQGVAFAAKKFGCKAVIVMPTVTPLIKVNRTKSYGAEV 117
++ ASAGNHAQGVA A+ G K+ + MP PL K+ T+ YGA+V
Sbjct: 73 VVAASAGNHAQGVALASSLLGAKSTVFMPLRAPLPKLAATRGYGADV 119
>PDD351N1 (Closest domain: F4Q8I7_DICFS 65-355)
Number of domains in family: 2
Commentary (automatic):
FULL=THREONINE SUBNAME: LYASE AMMONIA-LYASE
Length = 291
Score = 110 (47.0 bits), Expect = 0.002
Identities = 55/223 (24%), Positives = 91/223 (40%), Gaps = 24/223 (10%)
Query: 4 LEKFEEASELVKKVTNSTKLVYSDYLSEQSGGKVYLKPENMQHTGAYKIR-------GAY 56
+E S V T ++ + LS+ V LK EN+Q G +R G Y
Sbjct: 127 IESVNRVSSYVSTYLKKTPQLHYELLSQLFKCNVQLKLENLQLFGDVYVRNCFSVLIGNY 186
Query: 57 Y-KISTLSDEERGRGLITASAGNHA-------QGVAFAAKKFGCKAVI-VMP---TVTPL 104
+ ++ST+ E R G + G+ A K +I V P + +
Sbjct: 187 FNQVSTIKKELREVGGYVSVMDPDKFDLQATFAGIVLTAIHLKMKFIIYVAPGKLNILQV 246
Query: 105 IKVNRTKSYGAEVILHGDVYDDAYAYACELAEKEGYTFVH-PFNDIDVATGQGTIAMEIV 163
+++ + GA++I H Y A + A FV FN G GT+A E++
Sbjct: 247 VQLYMCHARGAKIIFHKGDTQTCYQRAKQHANDLHMVFVDMKFNPQFSLIGAGTLASEMM 306
Query: 164 QELPTVDYILVPIG----GGGLVSGVATLAKMLNPKIKVIGVE 202
++ D I++P+ G VS ++ K+ PK+K I V+
Sbjct: 307 EDCNDRDAIIIPLRMYSVGWSYVSAISLFYKIKQPKMKTIVVQ 349
>PDC650L5 (Closest domain: B9KPT4_RHOSK 71-103)
Number of domains in family: 178
Commentary (automatic):
SUBNAME: FULL=THREONINE DEHYDRATASE LYASE EC=4.3.1.19 BIOSYNTHETIC FULL=L-THREONINE BIOSYNTHESIS AMMONIA-LYASE ILVA
Length = 33
Score = 108 (46.2 bits), Expect = 0.0003
Identities = 19/31 (61%), Positives = 22/31 (70%), Gaps = 16/31 (51%)
Query: 69 RGLITASAGNHAQGVAFAAKKFGCKAVIVMP 99
R + ASAGNHAQGVA+A + FG K I MP
Sbjct: 71 RSFVCASAGNHAQGVAYACRHFGVKGTIFMP 101
>PDA346P1 (Closest domain: B8N1M7_ASPFN 39-138)
Number of domains in family: 123
Commentary (automatic):
BIOSYNTHESIS SUBNAME: SYNTHASE FULL=CYSTEINE TRANSFERASE EC=2.5.1.47 RECNAME: CYSTEINE AMINO-ACID FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT
Length = 100
Score = 106 (45.4 bits), Expect = 0.001
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 130 YACELAEKEGYTFVHPFNDIDVATGQGTIAMEIVQELPTVDYILVPIGGGGLVSGVATLA 189
+A E++ +GY F + F + D G TI E+VQ++P +D +G G+V GVA +
Sbjct: 77 HAEEVSRSDGYYFTNQFKNRDALVGYETIGRELVQQVPEIDAFCGAVGTEGMVMGVARVP 136
Query: 190 K 190
K
Sbjct: 137 K 137
>PD709608 (Closest domain: F9ZVU1_METMM 169-207)
Number of domains in family: 143
Commentary (automatic):
SUBNAME: BIOSYNTHESIS SYNTHASE FULL=CYSTEINE DEHYDRATASE TRANSFERASE RECNAME: CYSTEINE EC=2.5.1.47 AMINO-ACID
Length = 39
Score = 104 (44.7 bits), Expect = 0.001
Identities = 18/32 (56%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 172 ILVPIGGGGLVSGVATLAKMLNPKIKVIGVEP 203
I VP+GGGGLV+G+A K + P+I++I VEP
Sbjct: 172 IFVPVGGGGLVAGIAAYVKFVRPEIRIIAVEP 203
>PDC69598 (Closest domain: A6L731_BACV8 45-69)
Number of domains in family: 61
Commentary (automatic):
SUBNAME: DEHYDRATASE FULL=THREONINE LYASE EC=4.3.1.19 FULL=PUTATIVE THREONINE UNCHARACTERIZED AMMONIA-LYASE FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT
Length = 25
Score = 102 (43.9 bits), Expect = 0.002
Identities = 18/25 (72%), Positives = 23/25 (92%), Gaps = 1/25 (4%)
Query: 47 TGAYKIRGAYYKISTLSDEERGRGL 71
TG++K+RGAYYKIS LSDEE+ RG+
Sbjct: 45 TGSFKVRGAYYKISQLSDEEKARGV 69
>PD925716 (Closest domain: Q7VK29_HELHP 55-116)
Number of domains in family: 3520
Commentary (automatic):
BIOSYNTHESIS SYNTHASE FULL=CYSTEINE EC=2.5.1.47 TRANSFERASE RECNAME: CYSTEINE AMINO-ACID SUBNAME: LYASE
Length = 62
Score = 101 (43.5 bits), Expect = 0.004
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 7/48 (14%)
Query: 71 LITASAGNHAQGVAFAAKKFGCKAVIVMPTVTPLIKVNRTKSYGAEVI 118
+I A+AGN G+AF A+ FGCKA++++P + K ++ GA+VI
Sbjct: 66 IIEATAGNTGLGIAFVAQHFGCKAILIVPDKFSIEKQILMRALGAQVI 113
>PDD9Q131 (Closest domain: Q8WW81_HUMAN 67-135)
Number of domains in family: 1
Commentary (automatic):
SUBNAME: REFERENCE FULL=SDS FULL=UNCHARACTERIZED
Length = 69
Score = 101 (43.5 bits), Expect = 0.004
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 88 KKFGCKAVIVMPTVTPLIKVNRTKSYGAEVILHGDVYDDAYAYACELAEKE-GYTFVHP 145
++ G A IV+P+ TP + + R K+ GA V + G++ D+A+ A LA+ G+ ++ P
Sbjct: 77 RQLGVPATIVVPSTTPALTIERLKNEGATVKVVGELLDEAFELAKALAKNNPGWVYIPP 135
>PDA1P539 (Closest domain: Q1I705_PSEE4 136-195)
Number of domains in family: 754
Commentary (automatic):
SUBNAME: SYNTHASE FULL=THREONINE LYASE EC=4.2.3.1 FULL=L-THREONINE REFERENCE THREONINE FULL=PUTATIVE THRC
Length = 60
Score = 101 (43.5 bits), Expect = 0.004
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 74 ASAGNHAQGVAFAAKKFGCKAVIVMPTVTPLIKVNRTKSYGAEVILHGDVYDDAY 128
AS GN A +A + + G + VI +P TP K+ + YGAEVIL YD+A+
Sbjct: 139 ASTGNAASALAGMSAERGLRNVIFIPRTTPREKLAQMIGYGAEVILVDGAYDEAF 193
>PDB003Y9 (Closest domain: A2BKW1_HYPBU 134-233)
Number of domains in family: 141
Commentary (automatic):
SUBNAME: SYNTHASE FULL=THREONINE LYASE EC=4.2.3.1 BETA SUBUNIT FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT THREONINE FULL=PUTATIVE
Length = 100
Score = 101 (43.5 bits), Expect = 0.005
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 90 FGCKAVIVMPTVTPLIKVNRTKSYGAEVILHGDVYDDAYAYACELAEKEGYTFVHPFNDI 149
+G +A I MP P K ++ G EV+L + A A EL + + + H ++
Sbjct: 134 YGLRARIYMPVNAPEGKKRLVRALGGEVVLTPSRGEAAQAVLWELKKPDVFYVAHTWSPF 193
Query: 150 DVATGQGTIAMEIVQELPTVDYILVPIGGGGLVSGV 185
V G TIA E ++ +LVP+G GGL+ G+
Sbjct: 194 YVE-GAKTIAFEAFEDGFRGSAVLVPVGSGGLLLGI 228
>PDB0H284 (Closest domain: D8J781_HALJB 149-236)
Number of domains in family: 190
Commentary (automatic):
SUBNAME: SYNTHASE FULL=CYSTEINE TRANSFERASE EC=2.5.1.47 A CYSTEINE FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT FULL=PUTATIVE BETA
Length = 88
Score = 99 (42.7 bits), Expect = 0.009
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 131 ACELAEKEGYTFVHPF-NDIDVATGQGTIAMEIVQELP-TVDYILVPIGGGGLVSGVATL 188
A +AEK G TF++ + N+++ E++++L V +I+ P+G GG VSG+A
Sbjct: 151 AKRIAEKTGGTFLNQYENELNPQVHYEWTGEEVLEQLGGEVTHIVSPMGTGGTVSGIARR 210
Query: 189 AKMLNPKIKVIGVE 202
K P+++VIGV+
Sbjct: 211 VKEEYPEVRVIGVD 224
>PDB1O9V8 (Closest domain: B2JCU4_BURP8 146-204)
Number of domains in family: 22
Commentary (automatic):
SUBNAME: FULL=THREONINE DEHYDRATASE REFERENCE FULL=PUTATIVE UNCHARACTERIZED SHOTGUN LYASE GENOME SEQUENCE
Length = 59
Score = 99 (42.7 bits), Expect = 0.008
Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 142 FVHPFNDIDVATGQGTIAMEIV-QELPTVDYILVPIGGGGLVSGVATLAKMLNPKIKVI 199
FVHPF+D V GQGT+AME++ Q + I VPIGGGGL +G+A K + P+IKVI
Sbjct: 146 FVHPFDDPYVIAGQGTVAMEVLSQHQAPIHAIFVPIGGGGLAAGIAAYVKSVRPEIKVI 204
>PDC422M4 (Closest domain: E8U0E2_ALIDB 159-209)
Number of domains in family: 20
Commentary (automatic):
SUBNAME: DEHYDRATASE LYASE EC=4.3.1.19 AMMONIA-LYASE FULL=THREONINE FULL=PYRIDOXAL-5_apos;-PHOSPHATE-DEPENDENT ALTNAME: BETA SUBUNIT
Length = 51
Score = 99 (42.7 bits), Expect = 0.006
Identities = 27/49 (55%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 154 GQGTIAMEIVQELPTVDYILVPIGGGGLVSGVATLAKMLNPKIKVIGVE 202
GQGT+A E+ +E+P +DY+ VP+GGGGL+SG A+ L P+ +VIGVE
Sbjct: 161 GQGTVAKELFEEVPHLDYLFVPLGGGGLLSGSLLAAQRLAPQCRVIGVE 209
>PDB021T5 (Closest domain: Q03MP7_STRTD 176-207)
Number of domains in family: 194
Commentary (automatic):
SUBNAME: FULL=THREONINE DEHYDRATASE LYASE EC=4.3.1.19 BIOSYNTHETIC BIOSYNTHESIS FULL=L-THREONINE AMMONIA-LYASE ILVA
Length = 32
Score = 97 (42.0 bits), Expect = 0.009
Identities = 20/31 (64%), Positives = 25/31 (80%), Gaps = 2/31 (6%)
Query: 170 DYILVPIGGGGLVSGVATLAKMLNPKIKVIG 200
D ILVP+GGGGL+SGVAT K + P I+V+G
Sbjct: 177 DSILVPVGGGGLISGVATYIKDVAPSIEVVG 207
