Organism Overview for Campylobacter coli RM2228 (306254.1)

GenomeCampylobacter coli RM2228 (Taxonomy ID: 306254)   
DomainBacteria
TaxonomyBacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter; Campylobacter coli; Campylobacter coli RM2228; Campylobacter coli RM2228
NeighborsView closest neighbors
Size1,860,666
Number of Contigs (with PEGs)38
Number of Subsystems275
Number of Coding Sequences2069
Number of RNAs56
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instituteJ. Craig Venter Institute
instituteUSDA-ARS, Bacterial Epidemiology and Antimicrobial Resistance Research Unit, USA, Athens
institute organism nameCampylobacter coli RM2228
seq typechromosome
seq typeplasmid
contactFouts DE
project id12516
project id13964
gold cardGi00118
ncbi taxonomy id306254
pubmed id15660156
refseq accNC_008049;NC_008050;NC_008051
refseq accNZ_AAFL00000000
genbank accAAFL00000000
genbank accDQ518170;DQ518171;DQ518172
shapeSpiral
habitatMultiple
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Browse through the features of Campylobacter coli RM2228 both graphically and through a table. Both allow quick navigation and filtering for features of your interest. Each feature is linked to its own detail page.

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Subsystem Information

Subsystem StatisticsFeatures in Subsystems 
Subsystem CoverageSubsystem Category DistributionSubsystem Feature Counts
   Phages, Prophages, Transposable elements (0)
   Autotrophy (0)
   Arabinose Sensor and transport module (0)
   Cofactors, Vitamins, Prosthetic Groups, Pigments (152)
   Virulence, Disease and Defense (49)
   Photosynthesis (0)
   Miscellaneous (43)
   Central Carbon Metabolism (0)
   Phages, Prophages, Transposable elements, Plasmids (0)
   Transcriptional regulation (0)
   Cell Division and Cell Cycle (25)
   Regulation and Cell signaling (18)
   Virulence (26)
   Fatty Acids, Lipids, and Isoprenoids (67)
   Nitrogen Metabolism (12)
   Dormancy and Sporulation (1)
   Respiration (78)
   Central metabolism (0)
   Predictions based on plant-prokaryote comparative analysis (10)
   Metabolism of Aromatic Compounds (2)
   Metabolite damage and its repair or mitigation (0)
   Phosphorus Metabolism (21)
   Carbohydrates (87)
   Biotin Utilization (0)
   Phenylacetic acid degradation (0)
   Energy Metabolism (0)
   Potassium metabolism (11)
   Plasmids (0)
   Membrane Transport (61)
   Iron acquisition and metabolism (48)
   Nucleosides and Nucleotides (47)
   Motility and Chemotaxis (86)
   Secondary Metabolism (0)
   Stress Response (52)
   Plant cell walls and outer surfaces (0)
   Sulfur Metabolism (5)
   Amino Acids and Derivatives (205)
  
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