Annotation Overview for fig|426430.8.peg.395 in Staphylococcus aureus subsp. aureus str. Newman:
Integrase, superantigen-encoding pathogenicity islands SaPI

[to old protein page]

current assignment	Integrase, superantigen-encoding pathogenicity islands SaPI
taxonomy id	426430	contig	NC_009641 (2,878,897bp)
internal links	genome browser | feature evidence | sequence	ACH Annotation Clearinghouse (ACH) The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling). [?]	show essentially identical genes
annotation history		run tool	Psi-BlastTMpredTMHMMGram negative PSORTGram negative SignalPGram positive PSORTGram positive SignalPLipoPRadarPPSearchGram negative CELLOGram positive CELLOProDomPDBRNAFold
FigFam	FIG00016939	CDD link	show cdd
PATtyfam	PGF_03473517: hypothetical protein PLF_1279_00002808: hypothetical protein
PATRIC link	19584104
edit functional role	Integrase, superantigen-encoding pathogenicity islands SaPI
aliases	cmr|NT05SA0315 geneID|5330195 gi|151220573 gnl|md5|245ce9c5392685f7f226968f locus|NWMN_0361 protein_id|YP_001331395.1	propagation lock	Unlocked Toggle lock

Annotation History (history of similar genes)

Date	Annotator	Annotation
11/26/2009	rapid_propogation	Set function to hypothetical protein from original annotations
11/26/2009	rapid_propogation	Set function to integrase-like protein based on unreliable automated assignments
1/14/2013	BobO	Set master function to Integrase, superantigen-encoding pathogenicity islands SaPI
1/14/2013	BobO	Assignment projected from fig|1028799.3.peg.315 based on identical sequence

The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.