Annotation Overview for fig|426430.8.peg.2777 in Staphylococcus aureus subsp. aureus str. Newman:
Biofilm operon icaABCD HTH-type negative transcriptional regulator IcaR

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current assignmentBiofilm operon icaABCD HTH-type negative transcriptional regulator IcaR
taxonomy id426430contig
internal linksgenome browser | feature evidence | sequenceACH [?]show essentially identical genes
PubMed links15060048
10496925
annotation historyrun tool
FigFamFIG00014093CDD linkshow cdd
PATtyfamPGF_00403764: Biofilm operon icaABCD HTH-type negative transcriptional regulator IcaR
PLF_1279_00001893: Biofilm operon icaABCD HTH-type negative transcriptional regulator IcaR
alignments and trees23 alignments and treesPATRIC link19589004
edit functional roleBiofilm operon icaABCD HTH-type negative transcriptional regulator IcaR
aliases
propagation lock
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This feature is part of a subsystem
  • In Biofilm formation in Staphylococcus its role is Biofilm operon icaABCD HTH-type negative transcriptional regulator IcaR.
  • Reasons for Current Assignment

    We have assigned the function "Biofilm operon icaABCD HTH-type negative transcriptional regulator IcaR" to the encoded protein. The protein occurs in 1 subsystem: "Biofilm formation in Staphylococcus". The function of this gene is asserted in 15060048 and 10496925.

    Compare Regions For fig|426430.8.peg.2777

    The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.