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The Annotation Clearinghouse offers a mapping of genes which are identical in sequence except for the start region (due to differences in start calling).
PGF_00062051: TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA PLF_1279_00002280: TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA
Set function to
hypothetical protein
from original annotations
11/26/2009
rapid_propogation
Set function to
Sua5 YciO YrdC YwlC family protein
based on FIGfams
1/21/2012
md5_consistency
Set master function to
YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA
1/21/2012
md5_consistency
assignment made to reconcile multiple functions for the same md5
8/25/2012
SvetaG
Set master function to
COG0009 YrdC subfamily, required for N6-threonylcarbamoyl adenosine t(6)A37 modification in tRNA
8/25/2012
SvetaG
Assigned based on tree proximity to fig|439846.4.peg.3890
8/25/2012
SvetaG
Set master function to
TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA
8/25/2012
SvetaG
Role changed from 'COG0009 YrdC subfamily, required for N6-threonylcarbamoyl adenosine t(6)A37 modification in tRNA' to 'TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA'
8/25/2012
SvetaG
Master function set by SvetaG at 1345954041
TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA
3/13/2017
gjo
Set master function to
Threonylcarbamoyl-AMP synthase (EC 2.7.7.87)
3/13/2017
gjo
Assignment projected from fig|158878.1.peg.978 based on identical sequence
11/30/2019
gjo
Set master function to
Threonylcarbamoyl-AMP synthase-like protein
11/30/2019
gjo
Assignment projected from fig|158878.1.peg.978 based on identical sequence
This feature is part of a subsystem
In position 37 its role is Sua5 YciO YrdC YwlC family protein. However, the functionality of this subsystem has not yet been classified for this organism.
In tRNA mods Archaea its role is TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA. However, the functionality of this subsystem has not yet been classified for this organism.
In TsaC PrmC its role is TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA. However, the functionality of this subsystem has not yet been classified for this organism.
In t6A synthesis in bacteria its role is TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA. However, the functionality of this subsystem has not yet been classified for this organism.
In DprA its role is TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA. However, the functionality of this subsystem has not yet been classified for this organism.
In yrdC its role is TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA. However, the functionality of this subsystem has not yet been classified for this organism.
In nonosh its role is TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA. However, the functionality of this subsystem has not yet been classified for this organism.
In Experimental tye its role is Sua5 YciO YrdC YwlC family protein.
In LMPTP YwlE cluster its role is TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA.
In YrdC-YciO its role is TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA.
In YrdC-YciO-Sua5 and associated protein families its role is TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA.
In tRNA modification Archaea its role is TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA.
Compare Regions For fig|158879.11.peg.893
The chromosomal region of the focus gene (top) is compared with four similar organisms. The graphic is centered on the focus gene, which is red and numbered 1. Sets of genes with similar sequence are grouped with the same number and color. Genes whose relative position is conserved in at least four other species are functionally coupled and share gray background boxes. The size of the region and the number of genomes may be reset. Click on any arrow in the display to refocus the comparison on that gene. The focus gene always points to the right, even if it is located on the minus strand.
